Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Corynebacterium efficiens YS-314

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AcnR Citrate Tricarboxylic acid cycle 2 1
TF AmtR GlnK-AMP, signal transduction protein Nitrogen metabolism 19 17
TF ArgR Arginine Arginine biosynthesis 2 4
TF ArsR Arsenite; Arsenate Arsenic resistance 3 4
TF BenR Benzoate degradation 4 3
TF BioQ Biotin Biotin biosynthesis 4 5
TF BioQ Biotin Biotin biosynthesis 3 5
TF CadR Cadmium, ion (Cd2+) Cadmium resistance 2 2
TF Cg0454 Multidrug resistance 1 3
TF Cg0646 1 1
TF Cg0979 Lipoprotein export 1 1
TF Cg1053 Multidrug resistance 1 1
TF Cg1143 2 2
TF Cg1211 Metabolite transport 2 4
TF Cg1831 Iron homeostasis 2 2
TF Cg2544 2 2
TF Cg3239 Metabolite transport 2 2
TF Cg3261 Multidrug resistance; Multidrug efflux 1 1
TF CitB Citrate Citrate utilization 2 2
TF ClgR DNA damage Proteolysis 8 6
TF CsoR Copper ion, (Cu+) Copper resistance 2 1
TF DtxR Iron ion, (Fe2+) Iron homeostasis 19 10
TF FasR Fatty acid biosynthesis 4 2
TF FruR Fructose-6-phosphate Fructose utilization 2 2
TF GenR Gentisate; 3-hydroxybenzoate 3-hydroxybenzoate degradation 3 3
TF GlxR Cyclic 3',5'-AMP Energy metabolism; Carbohydrate metabolism 116 91
TF GntR Gluconate Gluconate utilization 6 5
TF HrcA Heat shock Heat shock response 2 3
TF HspR Heat shock Heat shock response 2 2
TF LexA DNA damage SOS response 21 18
TF LldR L-lactate Lactate utilization 4 4
TF LtbR Tryptophan biosynthesis; Leucine biosynthesis 7 9
TF LysG Lysine; Histidine; Arginine Amino acid efflux 2 2
TF McbR S-adenosylmethionine; S-adenosylhomocysteine Methionine biosynthesis 18 24
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 1 2
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 7 7
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 7 14
TF PcaO Protocatechuate Protocatechuate degradation 1 1
TF PcaR Protocatechuate degradation 7 4
TF QsuR Shikimate; Quinate Aromatic amino acid metabolism 2 2
TF RbsR Ribose Ribose utilization 2 2
TF RosR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Peroxide stress response 10 8
TF SufR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF SutR Sulfate Sulfur metabolism 1 1
TF UriR New effector Pyrimidine utilization; Uridine utilization 1 1
TF VanR Vanillate; Ferulic acid Vanillate utilization 2 2
TF Znr Zinc ion, (Zn2+) Zinc homeostasis 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 1
RNA L10_leader Ribosome biogenesis 2 1
RNA PyrR PyrR Pyrimidine metabolism 1 1
RNA S15 Ribosome biogenesis 1 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 5 4
RNA Trp_leader Tryptophan biosynthesis 3 1
RNA ydaO-yuaA Cell wall metabolism 2 2
RNA yybP-ykoY 2 1
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