Regulon of GlxR in Corynebacterium efficiens YS-314
| Regulator type: | Transcription factor |
| TF locus tag: | CE0287 |
| Regulator family: | CRP |
| Regulation mode: | repressor (activator) |
| Biological process: | Energy metabolism; Carbohydrate metabolism |
| Effector: | Cyclic 3',5'-AMP |
| Regulog: | GlxR - Corynebacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 155 |
| - Operons | 77 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - CRP
- By effector - Cyclic 3',5'-AMP
- By pathway - Energy metabolism
- By pathway - Carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -84
Score: 3.5 Sequence: TGTGATGCATTCGACA
Locus tag: CE0283
Name: whiB4 Funciton: Predicted transcriptional regulator, WhiB family |
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whiB4
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Predicted transcriptional regulator, WhiB family
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Position: -212
Score: 3.9 Sequence: TGTGATGAAATTAACT
Locus tag: CE2419
Name: nrdF Funciton: Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) |
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nrdF
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Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)
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Position: -144
Score: 4.1 Sequence: TGTGATCTGCAGCATA
Locus tag: CE0158
Name: gltB Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: CE0159
Name: gltD Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
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gltB
|
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
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gltD
|
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
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Position: -259
Score: 4.2 Sequence: AGTGATGAGGATCACG
Position: -133
Score: 4.2 Sequence: TGTGAAGCACGCCACC
Position: -83
Score: 3.8 Sequence: GGGGATTCGCATCACA
Locus tag: CE2232
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30) |
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aceA
|
Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30)
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Position: -222
Score: 4.3 Sequence: TGTGAGCAGTATCACT
Locus tag: CE0386
Name: sdhC Funciton: Succinate dehydrogenase, cytochrome b subunit (EC 1.3.99.1)
Locus tag: CE0387
Name: sdhA Funciton: Succinate dehydrogenase, flavoprotein subunit (EC 1.3.99.1)
Locus tag: CE0388
Name: sdhB Funciton: Succinate dehydrogenase, iron-sulfur cluster subunit (EC 1.3.99.1)
Locus tag: CE0389
Name: cg0448 Funciton: Conserved hypothetical protein |
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sdhC
|
Succinate dehydrogenase, cytochrome b subunit (EC 1.3.99.1)
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sdhA
|
Succinate dehydrogenase, flavoprotein subunit (EC 1.3.99.1)
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sdhB
|
Succinate dehydrogenase, iron-sulfur cluster subunit (EC 1.3.99.1)
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cg0448
|
Conserved hypothetical protein
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Position: -29
Score: 4 Sequence: GGTGACCCTGATCACG
Locus tag: CE0385
Name: ramB Funciton: Acetate metabolism transcriptional regulator RamB, XRE family |
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ramB
|
Acetate metabolism transcriptional regulator RamB, XRE family
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Position: -43
Score: 4.1 Sequence: AGTGAGTTGGGACACT
Locus tag: CE2502
Name: benE Funciton: Benzoate transporter |
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benE
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Benzoate transporter
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Position: -62
Score: 4.5 Sequence: TGTGAATCAGATCACC
Locus tag: CE2310
Name: benK Funciton: Benzoate transporter, MFS family |
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benK
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Benzoate transporter, MFS family
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Position: -194
Score: 3.8 Sequence: TGTGAGTAATCACACC
Locus tag: CE2384
Name: gntK Funciton: Gluconokinase (EC 2.7.1.12) |
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gntK
|
Gluconokinase (EC 2.7.1.12)
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Position: -157
Score: 4 Sequence: TGTGATTCAGGTCATG
Locus tag: CE2305
Name: benA Funciton: Benzoate 1,2-dioxygenase, alpha subunit (EC 1.14.12.10)
Locus tag: CE2306
Name: benB Funciton: Benzoate 1,2-dioxygenase, beta subunit (EC 1.14.12.10)
Locus tag: CE2307
Name: benC Funciton: Benzoate 1,2-dioxygenase, gamma subunit (EC 1.14.12.10)
Locus tag: CE2308
Name: benD Funciton: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) |
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benA
|
Benzoate 1,2-dioxygenase, alpha subunit (EC 1.14.12.10)
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benB
|
Benzoate 1,2-dioxygenase, beta subunit (EC 1.14.12.10)
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benC
|
Benzoate 1,2-dioxygenase, gamma subunit (EC 1.14.12.10)
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benD
|
1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
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Position: -264
Score: 4.1 Sequence: GGTGACGTTGCCCACA
Locus tag: CE0783
Name: whiB1 Funciton: Predicted transcriptional regulator, WhiB family |
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whiB1
|
Predicted transcriptional regulator, WhiB family
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Position: -262
Score: 4.2 Sequence: CGTGTGCTGAATCACA
Position: -180
Score: 3.5 Sequence: AGAGCCGGAGCTCACA
Locus tag: CE0784
Name: cg0879 Funciton: Conserved hypothetical protein |
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cg0879
|
Conserved hypothetical protein
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Position: -99
Score: 3.9 Sequence: AGTGTTGGGCTTCACA
Locus tag: CE1262
Name: putP Funciton: Sodium/proline symporter
Locus tag: CE1261
Name: cg1313 Funciton: Putative exported protein
Locus tag: CE1260
Name: cg1314 Funciton: integral membrane protein |
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putP
|
Sodium/proline symporter
|
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cg1313
|
Putative exported protein
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cg1314
|
integral membrane protein
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Position: -164
Score: 4.6 Sequence: TGTGATGTTCCACACA
Locus tag: CE0913
Name: fas-IB Funciton: Fatty acids acetyl transferase (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61) |
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fas-IB
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Fatty acids acetyl transferase (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61)
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Position: -167
Score: 4.4 Sequence: AGTGACATAGCCCACA
Locus tag: CE0971
Name: rpf2 Funciton: Cell wall-binding protein
Locus tag: CE0972
Name: ksgA Funciton: Dimethyladenosine transferase (EC 2.1.1.-)
Locus tag: CE0973
Name: ispE Funciton: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)
Locus tag: CE0974
Name: cg1040 Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: CE0975
Name: pdxK Funciton: Pyridoxal kinase (EC 2.7.1.35) |
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rpf2
|
Cell wall-binding protein
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ksgA
|
Dimethyladenosine transferase (EC 2.1.1.-)
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ispE
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)
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cg1040
|
Predicted ABC transporter, ATP-binding protein
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pdxK
|
Pyridoxal kinase (EC 2.7.1.35)
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Position: -259
Score: 3.4 Sequence: TGGGAATCATCTCACC
Locus tag: CE1004
Name: utrD Funciton: Urea ABC transporter, ATP-binding protein 1
Locus tag: CE1005
Name: utrE Funciton: Urea ABC transporter, ATP-binding protein 1 |
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utrD
|
Urea ABC transporter, ATP-binding protein 1
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utrE
|
Urea ABC transporter, ATP-binding protein 1
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Position: -100
Score: 3.9 Sequence: TGTGGGCTGCGACACC
Locus tag: CE1000
Name: utrA Funciton: Urea ABC transporter, substrate-binding protein
Locus tag: CE1001
Name: utrB Funciton: Urea ABC transporter, permease protein 1
Locus tag: CE1003
Name: utrB Funciton: Urea ABC transporter, permease protein 2 |
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utrA
|
Urea ABC transporter, substrate-binding protein
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utrB
|
Urea ABC transporter, permease protein 1
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utrB
|
Urea ABC transporter, permease protein 2
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Position: -61
Score: 3.7 Sequence: TGTTGCCCCAATCACA
Locus tag: CE1057
Name: coaA Funciton: Pantothenate kinase (EC 2.7.1.33) |
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coaA
|
Pantothenate kinase (EC 2.7.1.33)
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Position: -79
Score: 4.4 Sequence: TGTGTCGTGAACCACA
Locus tag: CE1067
Name: cg1142 Funciton: Conserved hypothetical protein
Locus tag: CE1066
Name: cg1141 Funciton: Conserved hypothetical protein
Locus tag: CE1065
Name: cg1140 Funciton: Conserved hypothetical protein
Locus tag: CE1064
Name: cg1139 Funciton: Conserved hypothetical protein |
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cg1142
|
Conserved hypothetical protein
|
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cg1141
|
Conserved hypothetical protein
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cg1140
|
Conserved hypothetical protein
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cg1139
|
Conserved hypothetical protein
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Position: -1
Score: 4.4 Sequence: TGTGGTTCACGACACA
Locus tag: CE1068
Name: cg1143 Funciton: Predicted transcriptional regulator, GntR family
Locus tag: CE1069
Name: cg1144 Funciton: Conserved hypothetical protein |
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cg1143
|
Predicted transcriptional regulator, GntR family
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cg1144
|
Conserved hypothetical protein
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Position: -160
Score: 3.8 Sequence: GGTGAATTACCACACC
Locus tag: CE1071
Name: fum Funciton: Fumarate hydratase class II (EC 4.2.1.2) |
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fum
|
Fumarate hydratase class II (EC 4.2.1.2)
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Position: -129
Score: 4.3 Sequence: TGAGACCCATATCACT
Locus tag: CE1133
Name: pobA Funciton: P-hydroxybenzoate hydroxylase (EC 1.14.13.2) |
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pobA
|
P-hydroxybenzoate hydroxylase (EC 1.14.13.2)
|
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Position: -179
Score: 3.8 Sequence: GGTGATGGGTGTCACC
Position: -105
Score: 3.4 Sequence: CGTGACCTGCGTTTCA
Locus tag: CE1259
Name: deaD Funciton: Cold shock ATP-dependent RNA helicase |
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deaD
|
Cold shock ATP-dependent RNA helicase
|
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Position: -57
Score: 4.1 Sequence: CGTGAATTAGAGCACA
Locus tag: CE1297
Name: narK Funciton: Nitrate/nitrite transporter
Locus tag: CE1296
Name: narG Funciton: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Locus tag: CE1295
Name: narH Funciton: Respiratory nitrate reductase beta chain (EC 1.7.99.4)
Locus tag: CE1294
Name: null Funciton: Respiratory nitrate reductase delta chain (EC 1.7.99.4)
Locus tag: CE1293
Name: narI Funciton: Respiratory nitrate reductase gamma chain (EC 1.7.99.4) |
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narK
|
Nitrate/nitrite transporter
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narG
|
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
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narH
|
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
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Respiratory nitrate reductase delta chain (EC 1.7.99.4)
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narI
|
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
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Position: -397
Score: 3.5 Sequence: TGTGAGCCTGATCCCC
Locus tag: CE2496
Name: qacX Funciton: Predicted permease |
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qacX
|
Predicted permease
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Position: -22
Score: 4.3 Sequence: TGTGATGTGTCACACT
Locus tag: CE0981
Name: echA3 Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
Locus tag: CE0982
Name: cg1050 Funciton: Conserved hypothetical protein |
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echA3
|
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
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cg1050
|
Conserved hypothetical protein
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Position: -120
Score: 3.9 Sequence: AGTGATTTGCATCGCT
Position: -34
Score: 3.9 Sequence: CGTGGCTCATGTCACT
Locus tag: CE1091
Name: cg0952 Funciton: Putative membrane protein
Locus tag: CE1092
Name: mctC Funciton: Monocarboxylic acid transporter |
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cg0952
|
Putative membrane protein
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mctC
|
Monocarboxylic acid transporter
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Position: -170
Score: 4.2 Sequence: TGTGAGTTAGGTAACT
Position: -135
Score: 3.9 Sequence: TGTGACCGACAACATA
Locus tag: CE0909
Name: cg0952 Funciton: Putative membrane protein
Locus tag: CE0910
Name: mctC Funciton: Monocarboxylic acid transporter |
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cg0952
|
Putative membrane protein
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mctC
|
Monocarboxylic acid transporter
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Position: -241
Score: 4.1 Sequence: AGTGTGCTGGTTCACA
Locus tag: CE1458
Name: ptsG Funciton: Glucose-specific PTS system, IIABC component |
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ptsG
|
Glucose-specific PTS system, IIABC component
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Position: -191
Score: 3.4 Sequence: CGTGACACGCGCCATA
Locus tag: CE1593
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
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ndh
|
NADH dehydrogenase (EC 1.6.99.3)
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Position: -248
Score: 4.4 Sequence: TGTGACTTGTCTCTCA
Locus tag: CE2085
Name: ctaE Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Locus tag: CE2084
Name: qcrC Funciton: Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Locus tag: CE2083
Name: qcrA Funciton: Ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC 1.10.2.2)
Locus tag: CE2082
Name: qcrB Funciton: Ubiquinol cytochrome C oxidoreductase, cytochrome B subunit (EC 1.10.2.2) |
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ctaE
|
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
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qcrC
|
Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
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qcrA
|
Ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC 1.10.2.2)
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qcrB
|
Ubiquinol cytochrome C oxidoreductase, cytochrome B subunit (EC 1.10.2.2)
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Position: -80
Score: 4.5 Sequence: TGAGATGTCCGTCACA
Locus tag: CE1688
Name: mptB Funciton: Putative membrane protein
Locus tag: CE1689
Name: CORAM0001_0942 Funciton: ABC-type multidrug transport system, ATPase component
Locus tag: CE1690
Name: CORAM0001_0941 Funciton: ABC drug efflux pump, inner membrane subunit, DrrB family
Locus tag: CE1691
Name: ctaA Funciton: Cytochrome oxidase assembly protein |
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mptB
|
Putative membrane protein
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CORAM0001_0942
|
ABC-type multidrug transport system, ATPase component
|
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CORAM0001_0941
|
ABC drug efflux pump, inner membrane subunit, DrrB family
|
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ctaA
|
Cytochrome oxidase assembly protein
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Position: -1
Score: 3.5 Sequence: AATGGACTCAATCACA
Locus tag: CE1844
Name: gluA Funciton: Glutamate ABC transporter, ATP-binding protein
Locus tag: CE1845
Name: gluB Funciton: Glutamate ABC transporter, substrate-binding protein
Locus tag: CE1846
Name: gluC Funciton: Glutamate ABC transporter, permease protein 1
Locus tag: CE1847
Name: gluD Funciton: Glutamate ABC transporter, permease protein 2 |
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gluA
|
Glutamate ABC transporter, ATP-binding protein
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gluB
|
Glutamate ABC transporter, substrate-binding protein
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gluC
|
Glutamate ABC transporter, permease protein 1
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gluD
|
Glutamate ABC transporter, permease protein 2
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Position: -263
Score: 4.2 Sequence: AGTGTCATGACTCACA
Position: -90
Score: 4.3 Sequence: TGAGATCTGTAACACA
Locus tag: CE1827
Name: fruR Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: CE1828
Name: pfkB Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: CE1829
Name: ptsF Funciton: Fructose-specific PTS, IIABC component
Locus tag: CE1830
Name: ptsH Funciton: Phosphocarrier protein of PTS system |
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fruR
|
Fructose utilization transcriptional regulator FruR, DeoR family
|
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pfkB
|
1-phosphofructokinase (EC 2.7.1.56)
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ptsF
|
Fructose-specific PTS, IIABC component
|
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ptsH
|
Phosphocarrier protein of PTS system
|
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Position: -156
Score: 4.3 Sequence: TGTGTTACAGATCTCA
Locus tag: CE1826
Name: ptsI Funciton: Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) |
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ptsI
|
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
|
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Position: -123
Score: 3.9 Sequence: GGTTATGTAGATCACC
Locus tag: CE1750
Name: cg1840 Funciton: Conserved hypothetical protein |
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cg1840
|
Conserved hypothetical protein
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Position: -49
Score: 3.7 Sequence: GGTGAACCGTCCCACA
Locus tag: CE1967
Name: glnK Funciton: Nitrogen regulatory protein PII
Locus tag: CE1966
Name: glnD Funciton: [Protein-PII] Uridylyltransferase |
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glnK
|
Nitrogen regulatory protein PII
|
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glnD
|
[Protein-PII] Uridylyltransferase
|
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Position: -249
Score: 3.7 Sequence: TGTGCCGGAGATTACA
Locus tag: CE1968
Name: amtB Funciton: ammonium transporter NrgA |
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amtB
|
ammonium transporter NrgA
|
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Position: -273
Score: 3.8 Sequence: TGTGATTTATTTCAAT
Locus tag: CE2903
Name: dtpT Funciton: Di-/tripeptide transporter |
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dtpT
|
Di-/tripeptide transporter
|
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Position: -30
Score: 4 Sequence: TGTAACCTAACTCACC
Locus tag: CE2862
Name: genK Funciton: Gentisate transporter
Locus tag: CE2863
Name: genH Funciton: 3-hydroxybenzoate 6-hydroxylase |
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genK
|
Gentisate transporter
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genH
|
3-hydroxybenzoate 6-hydroxylase
|
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Position: -35
Score: 4 Sequence: GGTGAGTTAGGTTACA
Locus tag: CE2861
Name: genR Funciton: 3-hydroxybenzoate degradation transcriptional regulator, IclR family |
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genR
|
3-hydroxybenzoate degradation transcriptional regulator, IclR family
|
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Position: -57
Score: 3.7 Sequence: TATGTTCGAGTTCACA
Locus tag: CE2860
Name: genD Funciton: Gentisate 1,2-dioxygenase (EC 1.13.11.4)
Locus tag: CE2859
Name: genF Funciton: Fumarylpyruvate hydrolase
Locus tag: CE2858
Name: genM Funciton: Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4) |
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genD
|
Gentisate 1,2-dioxygenase (EC 1.13.11.4)
|
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genF
|
Fumarylpyruvate hydrolase
|
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genM
|
Maleylpyruvate isomerase, mycothiol-dependent (EC 5.2.1.4)
|
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Position: -47
Score: 3.9 Sequence: GGTGACGTGCCTTACA
Locus tag: CE2761
Name: cg3226 Funciton: L-lactate permease, PF00083 family
Locus tag: CE2762
Name: lldD Funciton: L-lactate dehydrogenase (EC 1.1.2.3) |
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cg3226
|
L-lactate permease, PF00083 family
|
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lldD
|
L-lactate dehydrogenase (EC 1.1.2.3)
|
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Position: -391
Score: 4.6 Sequence: TGTGACATACATCATA
Locus tag: CE0894
Name: rpf1 Funciton: Resuscitation-promoting factor Rpf1 |
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rpf1
|
Resuscitation-promoting factor Rpf1
|
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Position: -230
Score: 4.2 Sequence: CGTGATCCTCATCACT
Position: -72
Score: 3.9 Sequence: GGTGATGGTTATCACT
Locus tag: CE2231
Name: glcB Funciton: Malate synthase G (EC 2.3.3.9) |
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glcB
|
Malate synthase G (EC 2.3.3.9)
|
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Position: -182
Score: 3.9 Sequence: TATGACGCTGACCACA
Locus tag: CE2420
Name: ftn Funciton: Ferritin |
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ftn
|
Ferritin
|
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Position: -236
Score: 4.3 Sequence: TGTGAGGGGGTTCACA
Locus tag: CE2418
Name: ctaD Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: CE2417
Name: serB Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
Locus tag: CE2416
Name: cg2778 Funciton: Putative hydrolase |
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ctaD
|
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
|
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serB
|
Phosphoserine phosphatase (EC 3.1.3.3)
|
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|
cg2778
|
Putative hydrolase
|
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|
Position: -327
Score: 3.4 Sequence: GGTGATCAGTACCATA
Locus tag: CE0281
Name: copB Funciton: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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copB
|
Copper-translocating P-type ATPase (EC 3.6.3.4)
|
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|
Position: -56
Score: 4 Sequence: TGTGGCCCGTGTCTCA
Locus tag: CE2691
Name: pck Funciton: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) |
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pck
|
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
|
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|
Position: -252
Score: 3.9 Sequence: TATGGTTTGTATCACT
Position: -223
Score: 4 Sequence: TGTGACACAGAAAACA
Locus tag: CE0053
Name: adhA Funciton: Alcohol dehydrogenase, Zn-dependent ( EC:1.1.1.1 ) |
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adhA
|
Alcohol dehydrogenase, Zn-dependent ( EC:1.1.1.1 )
|
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|
Position: 1
Score: 3.8 Sequence: TGTGCCCGCTGTCACA
Position: 30
Score: 3.6 Sequence: TGTCACCTGGCACACA
Locus tag: CE2625
Name: aldA Funciton: Aldehyde dehydrogenase (EC 1.2.1.3) |
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aldA
|
Aldehyde dehydrogenase (EC 1.2.1.3)
|
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|
Position: -133
Score: 4 Sequence: AGTGGGGTACGTCATA
Locus tag: CE2460
Name: actA Funciton: Butyryl-CoA:acetate-CoA transferase (EC 2.8.3.8) |
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actA
|
Butyryl-CoA:acetate-CoA transferase (EC 2.8.3.8)
|
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Position: -22
Score: 4.3 Sequence: AGTGATAGACTTCACA
Locus tag: CE2451
Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming], beta chain (EC 6.2.1.5) |
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sucC
|
Succinyl-CoA ligase [ADP-forming], beta chain (EC 6.2.1.5)
|
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Position: -240
Score: 3.7 Sequence: AGCGACGTACCTCACC
Locus tag: CE2104
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA
|
Glutamine synthetase type I (EC 6.3.1.2)
|
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Position: -197
Score: 4.2 Sequence: TGTGACGTAGGCTACA
Locus tag: CE2087
Name: ctaC Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: CE2086
Name: ctaF Funciton: Cytochrome c oxidase polypeptide IV (EC 1.9.3.1) |
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ctaC
|
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
|
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ctaF
|
Cytochrome c oxidase polypeptide IV (EC 1.9.3.1)
|
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Position: -1
Score: 3.5 Sequence: GGTGGCCCCGGTCACC
Locus tag: CE0277
Name: CE0277 Funciton: Hypothetical protein
Locus tag: CE0278
Name: copR Funciton: Copper homeostasis transcriptional regulator CopR, OmpR family
Locus tag: CE0279
Name: copS Funciton: Copper homeostasis regulatory system, sensor kinase |
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|
CE0277
|
Hypothetical protein
|
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copR
|
Copper homeostasis transcriptional regulator CopR, OmpR family
|
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copS
|
Copper homeostasis regulatory system, sensor kinase
|
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|
Position: -65
Score: 3.9 Sequence: AGAGACATAGATCATA
Position: -36
Score: 3.9 Sequence: TGTTTTGTGAACCACA
Locus tag: CE0611
Name: gntP Funciton: Gluconate permease |
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gntP
|
Gluconate permease
|
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Position: -64
Score: 3.4 Sequence: TGTAATCTGACTCCCA
Position: -36
Score: 4.3 Sequence: AGTGATGTAGAGCACT
Locus tag: CE0612
Name: cg3195 Funciton: Flavin-containing monooxygenase (FMO) |
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cg3195
|
Flavin-containing monooxygenase (FMO)
|
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Position: -250
Score: 4.5 Sequence: TGTGACGGACATCTCA
Locus tag: CE1687
Name: sufR Funciton: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family
Locus tag: CE1686
Name: sufB Funciton: Iron-sulfur cluster assembly protein SufB
Locus tag: CE1685
Name: sufD Funciton: Iron-sulfur cluster assembly protein SufD
Locus tag: CE1684
Name: sufC Funciton: Iron-sulfur cluster assembly ATPase protein SufC
Locus tag: CE1683
Name: sufS Funciton: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
Locus tag: CE1682
Name: sufU Funciton: Iron-sulfur cluster assembly scaffold protein
Locus tag: CE1681
Name: sufT Funciton: Predicted Fe-S cluster assembly protein |
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sufR
|
Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family
|
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sufB
|
Iron-sulfur cluster assembly protein SufB
|
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sufD
|
Iron-sulfur cluster assembly protein SufD
|
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sufC
|
Iron-sulfur cluster assembly ATPase protein SufC
|
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sufS
|
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
|
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sufU
|
Iron-sulfur cluster assembly scaffold protein
|
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sufT
|
Predicted Fe-S cluster assembly protein
|
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Position: -354
Score: 4.2 Sequence: TGTAGCCTACGTCACA
Locus tag: CE2088
Name: ltsA Funciton: Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) |
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ltsA
|
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
|
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|
Position: -132
Score: 4 Sequence: CATGACCTGAATCACA
Locus tag: CE2304
Name: catA Funciton: Protocatechuate 3,4-dioxygenase beta subunit (EC 1.13.11.1)
Locus tag: CE2303
Name: catB Funciton: Muconate cycloisomerase (EC 5.5.1.1)
Locus tag: CE2302
Name: catC Funciton: Muconolactone isomerase (EC 5.3.3.4) |
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catA
|
Protocatechuate 3,4-dioxygenase beta subunit (EC 1.13.11.1)
|
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catB
|
Muconate cycloisomerase (EC 5.5.1.1)
|
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catC
|
Muconolactone isomerase (EC 5.3.3.4)
|
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Position: -36
Score: 4.7 Sequence: TGAGATCTACATCACT
Locus tag: CE2301
Name: pcaH Funciton: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
Locus tag: CE2300
Name: pcaG Funciton: Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
Locus tag: CE2299
Name: pcaB Funciton: 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
Locus tag: CE2298
Name: pcaC Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) |
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pcaH
|
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
|
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pcaG
|
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
|
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pcaB
|
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
|
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pcaC
|
4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
|
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Position: -85
Score: 3.8 Sequence: CATGAAATAGGTCACA
Locus tag: CE0739
Name: CE0739 Funciton: Hypothetical protein
Locus tag: CE0740
Name: birA Funciton: Biotin-protein ligase (EC 6.3.4.15)
Locus tag: CE0741
Name: cg0815 Funciton: Putative membrane protein
Locus tag: CE0742
Name: purK Funciton: Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) |
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CE0739
|
Hypothetical protein
|
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birA
|
Biotin-protein ligase (EC 6.3.4.15)
|
||
|
cg0815
|
Putative membrane protein
|
||
|
purK
|
Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
|
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|
Position: -65
Score: 3.8 Sequence: TGTGACCTATTTCATG
Locus tag: CE0738
Name: accD1 Funciton: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) |
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accD1
|
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
|
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|
Position: -127
Score: 4.3 Sequence: TGTGGCCCACAGCACA
Locus tag: CE0716
Name: prpD Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
Locus tag: CE0717
Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: CE0718
Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) |
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prpD
|
2-methylcitrate dehydratase (EC 4.2.1.79)
|
||
|
prpB
|
Methylisocitrate lyase (EC 4.1.3.30)
|
||
|
prpC
|
2-methylcitrate synthase (EC 2.3.3.5)
|
||
|
Position: -371
Score: 3.8 Sequence: CGTGTTCTGCACCACT
Locus tag: CE2445
Name: ramA Funciton: Acetate metabolism transcriptional regulator RamA, LuxR family |
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ramA
|
Acetate metabolism transcriptional regulator RamA, LuxR family
|
||
|
Position: 29
Score: 4.1 Sequence: AGTGACCCAGGCCACC
Locus tag: CE2906
Name: citH Funciton: Citrate transporter CitH |
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citH
|
Citrate transporter CitH
|
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|
Position: -214
Score: 4.2 Sequence: TGTGACACACCTAACA
Locus tag: CE1309
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: CE1310
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: CE1311
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: CE1312
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: CE1313
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: CE1314
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: CE1315
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: CE1316
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
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atpB
|
ATP synthase A chain (EC 3.6.3.14)
|
||
|
atpE
|
ATP synthase C chain (EC 3.6.3.14)
|
||
|
atpF
|
ATP synthase B chain (EC 3.6.3.14)
|
||
|
atpH
|
ATP synthase delta chain (EC 3.6.3.14)
|
||
|
atpA
|
ATP synthase alpha chain (EC 3.6.3.14)
|
||
|
atpG
|
ATP synthase gamma chain (EC 3.6.3.14)
|
||
|
atpD
|
ATP synthase beta chain (EC 3.6.3.14)
|
||
|
atpC
|
ATP synthase epsilon chain (EC 3.6.3.14)
|
||
|
Position: -220
Score: 3.5 Sequence: AGTGACATGCGTCGCG
Locus tag: CE2467
Name: pstS Funciton: Phosphate ABC transport system, substrate-binding protein
Locus tag: CE2466
Name: pstC Funciton: Phosphate ABC transport system, permease protein 1
Locus tag: CE2465
Name: pstA Funciton: Phosphate ABC transport system, permease protein 2
Locus tag: CE2464
Name: pstB Funciton: Phosphate ABC transport system, ATP-binding protein |
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|
pstS
|
Phosphate ABC transport system, substrate-binding protein
|
||
|
pstC
|
Phosphate ABC transport system, permease protein 1
|
||
|
pstA
|
Phosphate ABC transport system, permease protein 2
|
||
|
pstB
|
Phosphate ABC transport system, ATP-binding protein
|
||
|
Position: -107
Score: 3.9 Sequence: AGTGATGGGGAACACT
Locus tag: CE2122
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) |
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|
thrC
|
Threonine synthase (EC 4.2.3.1)
|
||
|
Position: -385
Score: 4 Sequence: GGTGAAGAAGGACACA
Locus tag: CE2392
Name: fas-IA Funciton: [Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61) |
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|
fas-IA
|
[Acyl-carrier-protein] acetyl transferase of FASI (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI (EC 4.2.1.61)
|
||
|
Position: -382
Score: 3.7 Sequence: TGTGCCATGCTCCACT
Locus tag: CE0905
Name: gltA Funciton: Citrate synthase (EC 2.3.3.1) |
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|
gltA
|
Citrate synthase (EC 2.3.3.1)
|
||
|
Position: -347
Score: 4.4 Sequence: CGTGAGTAACATCACA
Locus tag: CE1659
Name: cg1735 Funciton: Secreted cell wall-associated hydrolase (invasion-associated protein) |
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|
cg1735
|
Secreted cell wall-associated hydrolase (invasion-associated protein)
|
||
|
Position: -289
Score: 4 Sequence: AGTGGTTTTCCTCACT
Position: -112
Score: 3.8 Sequence: GGAGTGGTAGCTCACA
Locus tag: CE2816
Name: dnaB Funciton: Replicative DNA helicase (EC 3.6.1.-) |
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|
dnaB
|
Replicative DNA helicase (EC 3.6.1.-)
|
||
|
Position: -153
Score: 3.5 Sequence: TGTGCCTCGGCACACC
Locus tag: CE1705
Name: pgk Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: CE1704
Name: tpiA Funciton: Triosephosphate isomerase (EC 5.3.1.1)
Locus tag: CE1703
Name: ppc Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
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|
pgk
|
Phosphoglycerate kinase (EC 2.7.2.3)
|
||
|
tpiA
|
Triosephosphate isomerase (EC 5.3.1.1)
|
||
|
ppc
|
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
|
||
|
Position: -1
Score: 4.1 Sequence: TGTGATCCATAACATA
Locus tag: CE0332
Name: cg3090 Funciton: Predicted permease, MFS family
Locus tag: CE0333
Name: rmlB2 Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2) |
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cg3090
|
Predicted permease, MFS family
|
||
|
rmlB2
|
UDP-glucose 4-epimerase (EC 5.1.3.2)
|
||
|
Position: -409
Score: 4.8 Sequence: GGTGATTTGCATCACA
Position: -115
Score: 4.1 Sequence: TGTTAGGTAAGTCTCA
Locus tag: CE1706
Name: gap Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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|
gap
|
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |