Regulon of PcaR in Corynebacterium efficiens YS-314

Properties
Regulator type:	Transcription factor
TF locus tag:	CE2294
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Protocatechuate degradation
Effector:
Regulog:	PcaR - Corynebacteriaceae
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Corynebacteriaceae
By TF family - IclR
By pathway - Protocatechuate degradation

Regulated operons
	Locus Tag	Name	Function
Position: -82 Score: 5.9 Sequence: GTCCGCTCTGCGAAC Locus tag: CE2301 Name: pcaH Funciton: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) Locus tag: CE2300 Name: pcaG Funciton: Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) Locus tag: CE2299 Name: pcaB Funciton: 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) Locus tag: CE2298 Name: pcaC Funciton: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
	CE2301	pcaH	Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
	CE2300	pcaG	Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
	CE2299	pcaB	3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
	CE2298	pcaC	4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
Position: 10 Score: 5.9 Sequence: GTTCGCTGAGCGAAC Locus tag: CE2294 Name: pcaR Funciton: Protocoatechuate utilization transription regulator PcaR, IclR family
	CE2294	pcaR	Protocoatechuate utilization transription regulator PcaR, IclR family
Position: 51 Score: 6.1 Sequence: GTTCGCTCAGCGAAC Locus tag: CE2293 Name: pcaI Funciton: 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
	CE2293	pcaI	3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
Position: -186 Score: 5.9 Sequence: GTTCACTCTGCGAAC Locus tag: CE1133 Name: pobA Funciton: Hydroxybenzoate hydroxylase (EC 1.14.13.2)
	CE1133	pobA	Hydroxybenzoate hydroxylase (EC 1.14.13.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD