Collection of regulogs for IclR transcription factor family
TF regulogs | 20 |
TF regulons | 108 |
TF binding sites | 476 |
IclR family of transcription factors includes diverse regulators that are involved the control of primary and secondary metabolism, virulence, multidrug resistance, degradation of aromatics, quorum sensing, and sporulation [22382436]. The IclR family comprises regulators acting as repressors, activators and proteins with a dual role [16472303]. IclR-family regulators collectively respond to wide variety of environmental signals, including glyoxylate, pyruvate, 4-nitrotoluene, benzonitrile, glycerol, glucose, 1-hexanol, succinic semialdehyde, allantoin, and many others. IclR-family regulators consist of two characteristic domains, an N-terminal HTH DNA binding domain (PF09339) and a C-terminal effector binding domain (PF01614).
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Phylum | Regulog | TF regulons (studied genomes) | TFBSs | Logo |
---|---|---|---|---|
Proteobacteria/gamma | AllR - Enterobacteriales | 2 (12) | 6 | ![]() |
Actinobacteria | Cg0646 - Corynebacteriaceae | 2 (8) | 2 | ![]() |
Actinobacteria | GenR - Corynebacteriaceae | 2 (8) | 6 | ![]() |
Proteobacteria/Gamma | HmgR - Pseudomonadaceae | 5 (8) | 12 | ![]() |
Proteobacteria/gamma | IclR - Enterobacteriales | 10 (12) | 10 | ![]() |
Proteobacteria/gamma | KdgR - Enterobacteriales | 9 (12) | 159 | ![]() |
Proteobacteria/gamma | KdgR - Pasteurellales | 2 (9) | 17 | ![]() |
Proteobacteria/gamma | KdgR - Vibrionales | 4 (10) | 40 | ![]() |
Thermotogae | KdgR - Thermotogales | 5 (11) | 26 | ![]() |
Firmicutes | KipR - Bacillales | 7 (11) | 9 | ![]() |
Actinobacteria | LtbR - Nocardiaceae | 4 (4) | 8 | ![]() |
Actinobacteria | LtbR - Bifidobacteriaceae | 9 (10) | 19 | ![]() |
Actinobacteria | LtbR - Corynebacteriaceae | 8 (8) | 52 | ![]() |
Actinobacteria | LtbR - Frankineae/Propionibacterineae/Pseudonocardiaceae | 8 (9) | 24 | ![]() |
Actinobacteria | LtbR - Micrococcineae | 9 (14) | 26 | ![]() |
Actinobacteria | LtbR - Mycobacteriaceae | 8 (9) | 30 | ![]() |
Actinobacteria | LtbR - Streptomycetaceae | 4 (4) | 8 | ![]() |
Chloroflexi | MhpR - Chloroflexia | 4 (5) | 6 | ![]() |
Actinobacteria | PcaR - Corynebacteriaceae | 2 (8) | 8 | ![]() |
Proteobacteria/gamma | YiaJ - Enterobacteriales | 4 (12) | 8 | ![]() |