Regulog LtbR - Nocardiaceae
| Regulator type: | Transcription factor |
| Regulator family: | IclR |
| Regulation mode: | repressor |
| Biological process: | Leucine biosynthesis |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By trascription factor - LtbR
- By TF family - IclR
- By pathway - Leucine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Nocardia farcinica IFM 10152 | 3 | 2 |
| Rhodococcus erythropolis PR4 | 3 | 2 |
| Rhodococcus opacus B4 | 3 | 2 |
| Rhodococcus sp. RHA1 | 3 | 2 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| ltbR |
*
Nocardia farcinica IFM 10152 Site: position = -24 score = 5.42288 sequence = TATACGAGACGCTAGTATC Gene: nfa42130: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family |
*
Rhodococcus erythropolis PR4 Site: position = -24 score = 5.83545 sequence = TATGCGAGAAACTGGTATC Gene: RER_24070: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family |
*
Rhodococcus opacus B4 Site: position = -24 score = 5.65633 sequence = TATGCGAGAAAGTGGTATC Gene: ROP_65490: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family |
*
Rhodococcus sp. RHA1 Site: position = -24 score = 5.65633 sequence = TATGCGAGAAAGTGGTATC Gene: RHA1_ro06498: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family |
Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family |
| CRON 2. | |||||
| leuC |
*
Nocardia farcinica IFM 10152 Site: position = -149 score = 5.42288 sequence = GATACTAGCGTCTCGTATA Gene: nfa42120: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
*
Rhodococcus erythropolis PR4 Site: position = -173 score = 5.83545 sequence = GATACCAGTTTCTCGCATA Gene: RER_24080: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
*2
Rhodococcus opacus B4 Site: position = -133 score = 5.65633 sequence = GATACCACTTTCTCGCATA Gene: ROP_65500: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Gene: ROP_53350: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
*2
Rhodococcus sp. RHA1 Site: position = -52 score = 5.65633 sequence = GATACCACTTTCTCGCATA Gene: RHA1_ro06499: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Gene: RHA1_ro00727: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) |
| leuD |
Gene: nfa42110: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Gene: RER_24090: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
2
Rhodococcus opacus B4 Gene: ROP_65510: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Gene: ROP_53340: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
2
Rhodococcus sp. RHA1 Gene: RHA1_ro06500: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Gene: RHA1_ro00726: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |