Regulog IclR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | IclR |
| Regulation mode: | repressor |
| Biological process: | Glyoxylate bypass |
| Effector: | Pyruvate; Glyoxylate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - IclR
- By effector - Pyruvate
- By effector - Glyoxylate
- By pathway - Glyoxylate bypass
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 3 | 1 |
| Salmonella typhimurium LT2 | 3 | 1 |
| Citrobacter koseri ATCC BAA-895 | 3 | 1 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 3 | 1 |
| Enterobacter sp. 638 | 3 | 1 |
| Erwinia amylovora ATCC 49946 | ||
| Yersinia pestis KIM | 3 | 1 |
| Serratia proteamaculans 568 | 3 | 1 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 3 | 1 |
| Edwardsiella tarda EIB202 | ||
| Proteus mirabilis HI4320 | 3 | 1 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 3 | 1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| aceB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -125 score = 8.32743 sequence = AAAATGGAAATTGTTTTTGATTTT Gene: b4014: malate synthase A |
*
Salmonella typhimurium LT2 Site: position = -125 score = 8.32743 sequence = AAAATGGAAATTGTTTTTGATTTT Gene: STM4183: malate synthase A |
*
Citrobacter koseri ATCC BAA-895 Site: position = -125 score = 8.32743 sequence = AAAATGGAAATTGTTTTTGATTTT Gene: CKO_03906: malate synthase A |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -117 score = 8.32743 sequence = AAAATGGAAATTGTTTTTGATTTT Gene: KPN_04395: malate synthase A |
*
Enterobacter sp. 638 Site: position = -127 score = 8.32743 sequence = AAAATGGAAATTGTTTTTGATTTT Gene: Ent638_0218: malate synthase A |
|
*
Yersinia pestis KIM Site: position = -147 score = 8.17439 sequence = AAAATGGAAATCGTTTTTGATTTT Gene: y0015: malate synthase A |
*
Serratia proteamaculans 568 Site: position = -172 score = 8.09146 sequence = AAAATGGAAATGGTTTTTGATTTT Gene: Spro_4503: malate synthase A |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -132 score = 8.32743 sequence = AAAATGGAAATTGTTTTTGATTTT Gene: ECA3991: malate synthase A |
|
*
Proteus mirabilis HI4320 Site: position = -80 score = 7.61703 sequence = AAAATGGAATTCATTTTTGATTTT Gene: PMI2764: malate synthase A |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -77 score = 7.89571 sequence = AAAATGGAAATCGTTTTTGATTTA Gene: plu4396: malate synthase A |
malate synthase A |
| aceA |
Gene: b4015: isocitrate lyase |
Gene: STM4184: isocitrate lyase |
Gene: CKO_03905: isocitrate lyase |
Gene: KPN_04396: isocitrate lyase |
Gene: Ent638_0219: isocitrate lyase |
|
Gene: y0016: isocitrate lyase |
Gene: Spro_4502: isocitrate lyase |
Gene: ECA3990: isocitrate lyase |
|
Gene: PMI2763: isocitrate lyase |
Gene: plu4395: isocitrate lyase |
isocitrate lyase |
| aceK |
Gene: b4016: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: STM4185: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: CKO_03904: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: KPN_04397: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: Ent638_0220: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
|
Gene: y0018: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: Spro_4501: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: ECA3989: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
|
Gene: PMI2762: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Gene: plu4394: bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
bifunctional isocitrate dehydrogenase kinase/phosphatase protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |