Profile of regulator KdgR in Thermotogales
Properties
| Regulator family: |
IclR |
| Regulation mode: |
repressor |
| Biological process: |
Glucuronate utilization |
| Effector: |
2-keto-3-deoxygluconate |
| Regulog: |
KdgR - Thermotogales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Thermotoga maritima MSB8
|
|
TM0064 |
uxaC |
-32 |
5.9 |
TGAGAAAACCATTTTCAAA |
|
TM0065 |
kdgR |
-88 |
5.9 |
TTTGAAAATGGTTTTCTCA |
|
TM0071 |
xloE |
-135 |
5.2 |
TTTGAAATAATCTTTTACA |
|
TM0070 |
xynB |
-103 |
5.2 |
TGTAAAAGATTATTTCAAA |
|
TM0060 |
xtpF |
-199 |
6 |
TGTGAAAGGAACTTTCAAA |
|
TM0061 |
xynA1 |
-138 |
6 |
TTTGAAAGTTCCTTTCACA |
|
Thermotoga sp. RQ2
|
|
TRQ2_0882 |
kdgR |
-88 |
5.9 |
TTTGAAAATGGTTTTCTCA |
|
TRQ2_0883 |
uxaC |
-32 |
5.9 |
TGAGAAAACCATTTTCAAA |
|
TRQ2_0886 |
xtpF |
-199 |
6 |
TGTGAAAGGAACTTTCAAA |
|
TRQ2_0885 |
xynA1 |
-138 |
6 |
TTTGAAAGTTCCTTTCACA |
|
Thermotoga neapolitana DSM 4359
|
|
CTN_0629 |
kdgR |
-48 |
6.1 |
TGTGAAAATGATTTTCTCA |
|
CTN_0630 |
uxaC |
-33 |
6.1 |
TGAGAAAATCATTTTCACA |
|
CTN_0633 |
null |
-191 |
5.9 |
TGTGAAAAAGGCTTTCAAA |
|
CTN_0632 |
xynA1 |
-91 |
5.9 |
TTTGAAAGCCTTTTTCACA |
|
Thermotoga petrophila RKU-1
|
|
Tpet_0860 |
uxaC |
-32 |
5.9 |
TGAGAAAACCATTTTCAAA |
|
Tpet_0859 |
kdgR |
-88 |
5.9 |
TTTGAAAATGGTTTTCTCA |
|
Tpet_0853 |
xloE |
-136 |
5.2 |
TTTGAAATAATCTTTTACA |
|
Tpet_0854 |
xynB |
-103 |
5.2 |
TGTAAAAGATTATTTCAAA |
|
Tpet_0863 |
xynA1 |
-139 |
6 |
TTTGAAAGTTCCTTTCACA |
|
Tpet_0864 |
xtpF |
-199 |
6 |
TGTGAAAGGAACTTTCAAA |
|
Thermotoga naphthophila RKU-10
|
|
Tnap_0695 |
kdgR |
-88 |
5.9 |
TTTGAAAATGGTTTTCTCA |
|
Tnap_0694 |
uxaC |
-32 |
5.9 |
TGAGAAAACCATTTTCAAA |
|
Tnap_0701 |
xloE |
-135 |
5.2 |
TTTGAAATAATCTTTTACA |
|
Tnap_0700 |
xynB |
-103 |
5.2 |
TGTAAAAGATTATTTCAAA |
|
Tnap_0691 |
xynA1 |
-138 |
6 |
TTTGAAAGTTCCTTTCACA |
|
Tnap_0690 |
xtpF |
-198 |
6 |
TGTGAAAGGAACTTTCAAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
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