Statistics of regulated genes

Genome	Genes	Operons
Escherichia coli str. K-12 substr. MG1655	11	10
Salmonella typhimurium LT2	15	12
Citrobacter koseri ATCC BAA-895	19	17
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	22	18
Enterobacter sp. 638	30	21
Erwinia amylovora ATCC 49946
Yersinia pestis KIM	19	14
Serratia proteamaculans 568	5	5
Erwinia carotovora subsp. atroseptica SCRI1043	42	31
Edwardsiella tarda EIB202	8	5
Proteus mirabilis HI4320
Photorhabdus luminescens subsp. laumondii TTO1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes													Function
CRON 1.
kdgK	* Escherichia coli str. K-12 substr. MG1655 Site: position = -86 score = 5.32094 sequence = TAATGGAACACTGTTTTAATA Gene: b3526: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Salmonella typhimurium LT2 Site: position = -85 score = 4.85834 sequence = TAATGGACCGATGTTTTAATA Gene: STM3612: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Citrobacter koseri ATCC BAA-895 Site: position = -87 score = 5.33122 sequence = TAATGGAACGATGTTTTAATA Gene: CKO_04968: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -87 score = 5.33122 sequence = TAATGGAACGATGTTTTAATA Gene: KPN_03876: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Enterobacter sp. 638 Site: position = -84 score = 5.08668 sequence = TTATGGAACGACGTTTTAATA Gene: Ent638_3923: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -225 score = 5.08791 sequence = ATTTAAAACACCGTTTTAATC Gene: y3838: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Serratia proteamaculans 568 Site: position = -105 score = 6.17307 sequence = AAATAAAACGTTGTTTTATTT Gene: Spro_4750: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -125 score = 5.37161 sequence = AAATAAAACATCGTTTCAAGA Gene: ECA4360: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	* Edwardsiella tarda EIB202 Site: position = -91 score = 5.37252 sequence = AAACAGAACGTTGTTTTATTT Gene: ETAE_3377: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
CRON 2.
ppsR	* Escherichia coli str. K-12 substr. MG1655 Site: position = -131 score = 5.25789 sequence = AAATGAAATGCTGTTTTCATA Gene: b1703: PEP synthetase regulatory protein	* Salmonella typhimurium LT2 Site: position = -131 score = 4.85744 sequence = AAATGAAACACACTTTTCATT Gene: STM1348: PEP synthetase regulatory protein	* Citrobacter koseri ATCC BAA-895 Site: position = -107 score = 5.46645 sequence = TATAAAAATAGCGTTTCATTT Gene: CKO_01727: PEP synthetase regulatory protein	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -97 score = 5.12755 sequence = AACAAAAATAGCGTTTCAATT Gene: KPN_02161: PEP synthetase regulatory protein	* Enterobacter sp. 638 Site: position = -107 score = 5.33969 sequence = ATTAAAAACACCATTTCATTT Gene: Ent638_1744: PEP synthetase regulatory protein	Erwinia amylovora ATCC 49946 Gene: EAM_1645: PEP synthetase regulatory protein	Yersinia pestis KIM Gene: y1929: PEP synthetase regulatory protein	* Serratia proteamaculans 568 Site: position = -134 score = 5.16114 sequence = ATTTGAAATAGTGTTTTACTT Gene: Spro_2173: PEP synthetase regulatory protein	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -94 score = 5.63269 sequence = TAATGAAATGGCGTTTTAATA Gene: ECA1852: PEP synthetase regulatory protein	Edwardsiella tarda EIB202 Gene: ETAE_1791: PEP synthetase regulatory protein	Proteus mirabilis HI4320 Gene: PMI1422: PEP synthetase regulatory protein	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu2629: PEP synthetase regulatory protein	PEP synthetase regulatory protein
CRON 3.
kduI	* Escherichia coli str. K-12 substr. MG1655 Site: position = -63 score = 5.4325 sequence = AAACGAAACAGTGTTTCACTA Site: position = -130 score = 6.25775 sequence = AAATGAAACATTGTTTTATTT Gene: b2843: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	* Salmonella typhimurium LT2 Site: position = -58 score = 5.26534 sequence = AATCAAAACAGTGTTTTGATT Site: position = -123 score = 6.231 sequence = AAATGAAACGTTGTTTTATTT Gene: STM3018: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	* Citrobacter koseri ATCC BAA-895 Site: position = -51 score = 4.39485 sequence = AAACGGAACGGTGTTTCGCCT Site: position = -119 score = 6.231 sequence = AAATGAAACAACGTTTTATTT Gene: CKO_04220: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Enterobacter sp. 638 Site: position = -60 score = 4.97537 sequence = AATCGGAACATTGTTTCGTTA Site: position = -127 score = 5.40034 sequence = AACTGAAACAACGTTTTAAAT Gene: Ent638_3296: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -201 score = 5.97045 sequence = TAATAAAACATCATTTCATTT Gene: y1887: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -209 score = 6.08823 sequence = AAATAAAACATTATTTCATTT Gene: ECA2400: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	* Edwardsiella tarda EIB202 Site: position = -129 score = 5.57573 sequence = AATCAAAACAGCATTTCATTT Gene: ETAE_1898: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	Proteus mirabilis HI4320 Gene: PMI2133: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)	Photorhabdus luminescens subsp. laumondii TTO1	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD	Escherichia coli str. K-12 substr. MG1655 Gene: b2842: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Salmonella typhimurium LT2 Gene: STM3017: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Citrobacter koseri ATCC BAA-895 Gene: CKO_04219: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -139 score = 5.15902 sequence = AAACGGAACTCTGTTTTATTT Site: position = -207 score = 5.83027 sequence = AAATGAAACATCGTTTTAAAT Gene: KPN_03265: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Enterobacter sp. 638 Gene: Ent638_3295: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y1886: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2401: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Edwardsiella tarda EIB202 Gene: ETAE_1899: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Proteus mirabilis HI4320 Gene: PMI2132: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Photorhabdus luminescens subsp. laumondii TTO1	2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
CRON 4.
kdgF	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	* Citrobacter koseri ATCC BAA-895 Site: position = -38 score = 5.55738 sequence = AGTTGAAACATTGTTTCAATA Gene: CKO_04218: Pectin degradation protein KdgF	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -39 score = 5.82635 sequence = AAATGAAACAATGTTTCACTT Gene: KPN_03255: Pectin degradation protein KdgF	* Enterobacter sp. 638 Site: position = -38 score = 5.49445 sequence = AATTAAAACAATGTTTCACTA Gene: Ent638_3287: Pectin degradation protein KdgF	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -155 score = 5.97045 sequence = AAATGAAATGATGTTTTATTA Gene: y1888: Pectin degradation protein KdgF	Serratia proteamaculans 568 Gene: Spro_2188: Pectin degradation protein KdgF	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -174 score = 6.08823 sequence = AAATGAAATAATGTTTTATTT Gene: ECA2399: Pectin degradation protein KdgF	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Pectin degradation protein KdgF
CRON 5.
yjcB	Escherichia coli str. K-12 substr. MG1655 Gene: b4060: putative inner membrane protein	* Salmonella typhimurium LT2 Site: position = -120 score = 5.38426 sequence = AATAGAAACAATGTTTCATTC Gene: STM4263: putative inner membrane protein	* Citrobacter koseri ATCC BAA-895 Site: position = -121 score = 5.11052 sequence = AACAGAAACGTTGTTTCATTC Gene: CKO_03830: putative inner membrane protein	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -113 score = 4.94925 sequence = AACAGAAATGGCGTTTCATCA Gene: KPN_04460: putative inner membrane protein	Enterobacter sp. 638 Gene: Ent638_0263: putative inner membrane protein	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2355: putative inner membrane protein	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	putative inner membrane protein
CRON 6.
yjgK	* Escherichia coli str. K-12 substr. MG1655 Site: position = -35 score = 6.04806 sequence = AAATGAAACGTTGTTTTAATT Gene: b4252: cytoplasmic protein involved in polygalacturonate utilization	* Salmonella typhimurium LT2 Site: position = -32 score = 5.65171 sequence = AAATAAAACGCTGTTTTAACT Gene: STM4468: cytoplasmic protein involved in polygalacturonate utilization	* Citrobacter koseri ATCC BAA-895 Site: position = -33 score = 6.231 sequence = AAATGAAACGTTGTTTTATTT Gene: CKO_03553: cytoplasmic protein involved in polygalacturonate utilization	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -33 score = 5.80666 sequence = AAATGAAATGCTGTTTTATAT Gene: KPN_04658: cytoplasmic protein involved in polygalacturonate utilization	* Enterobacter sp. 638 Site: position = -34 score = 6.03996 sequence = AAATGAAACATTGTTTTATAT Gene: Ent638_0453: cytoplasmic protein involved in polygalacturonate utilization	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -41 score = 5.93342 sequence = TAATAAAACAGCATTTCATTT Gene: y0739: cytoplasmic protein involved in polygalacturonate utilization	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -41 score = 5.05657 sequence = TTGTAAAACAGGGTTTCATTT Gene: ECA0383: cytoplasmic protein involved in polygalacturonate utilization	* Edwardsiella tarda EIB202 Site: position = -39 score = 5.56606 sequence = AAATAAAACGCAGTTTTATAA Gene: ETAE_3112: cytoplasmic protein involved in polygalacturonate utilization	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	cytoplasmic protein involved in polygalacturonate utilization
CRON 7.
kduD2	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	* Citrobacter koseri ATCC BAA-895 Site: position = -99 score = 5.91189 sequence = TTATAAAACACTGTTTCATTT Gene: CKO_01753: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -104 score = 5.80902 sequence = AATCAAAACATTGTTTCATTT Gene: KPN_01240: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	* Enterobacter sp. 638 Site: position = -94 score = 5.56972 sequence = TTTTAAAACATCATTTCATTT Gene: Ent638_1716: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
CRON 8.
ygjV	* Escherichia coli str. K-12 substr. MG1655 Site: position = -64 score = 5.35657 sequence = ATAAAAAACGGCGTTTCATAA Gene: b3090: putative transport protein	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03518: putative transport protein	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -133 score = 5.17562 sequence = ATATGAAACGGTGTTCTGTTT Gene: y3597: putative transport protein	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -70 score = 6.16722 sequence = AAATAAAACGGCGTTTCATTT Gene: ECA0648: putative transport protein	Edwardsiella tarda EIB202 Gene: ETAE_0439: putative transport protein	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	putative transport protein
CRON 9.
rhiT	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	* Citrobacter koseri ATCC BAA-895 Site: position = -190 score = 5.41818 sequence = AATAGAAACGCTGTTTTATAA Gene: CKO_01081: Rhamnogalacturonide transporter	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -200 score = 4.94227 sequence = AAGAGAAATGCTGTTTTATAA Gene: KPN_02390: Rhamnogalacturonide transporter	* Enterobacter sp. 638 Site: position = -189 score = 5.60112 sequence = AAAAGAAACGCTGTTTTATAA Gene: Ent638_2444: Rhamnogalacturonide transporter	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -167 score = 4.66061 sequence = AGTTAAAATGCCTTTTTATAA Gene: ECA3560: Rhamnogalacturonide transporter	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Rhamnogalacturonide transporter
rhiN	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01082: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02389: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Enterobacter sp. 638 Gene: Ent638_2443: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3559: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
CRON 10.
togM	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -211 score = 5.64427 sequence = AATTAAAACGGTGTTTTATAA Site: position = -288 score = 5.04706 sequence = TTTTGAAACATCGTTTCGACT Gene: KPN_03256: oligogalacturonide ABC transporter, inner membrane permease	* Enterobacter sp. 638 Site: position = -226 score = 5.12819 sequence = AATTAAAACGCCGTTTTACAA Gene: Ent638_3289: oligogalacturonide ABC transporter, inner membrane permease	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y1884: oligogalacturonide ABC transporter, inner membrane permease	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2403: oligogalacturonide ABC transporter, inner membrane permease	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	oligogalacturonide ABC transporter, inner membrane permease
togN	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03257: oligogalacturonide ABC transporter, inner membrane permease	Enterobacter sp. 638 Gene: Ent638_3290: oligogalacturonide ABC transporter, inner membrane permease	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y1883: oligogalacturonide ABC transporter, inner membrane permease	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2404: oligogalacturonide ABC transporter, inner membrane permease	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	oligogalacturonide ABC transporter, inner membrane permease
togA	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03258: oligogalacturonide ABC transporter, ATP-binding component	Enterobacter sp. 638 Gene: Ent638_3291: oligogalacturonide ABC transporter, ATP-binding component	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y1882: oligogalacturonide ABC transporter, ATP-binding component	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2405: oligogalacturonide ABC transporter, ATP-binding component	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	oligogalacturonide ABC transporter, ATP-binding component
togB	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03259: oligogalacturonide ABC transporter, solute-binding periplasmic protein	Enterobacter sp. 638 Gene: Ent638_3292: oligogalacturonide ABC transporter, solute-binding periplasmic protein	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y1881: oligogalacturonide ABC transporter, solute-binding periplasmic protein	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2406: oligogalacturonide ABC transporter, solute-binding periplasmic protein	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	oligogalacturonide ABC transporter, solute-binding periplasmic protein
ogl	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -299 score = 5.83027 sequence = ATTTAAAACGATGTTTCATTT Site: position = -103 score = 5.62695 sequence = TAATGAAACAATGTTTTGATA Gene: KPN_03266: Oligogalacturonate lyase (EC 4.2.2.6)	*2 Enterobacter sp. 638 Site: position = -105 score = 5.0171 sequence = CATTGAAACGTCGTTTTGATA Gene: Ent638_3297: Oligogalacturonate lyase (EC 4.2.2.6) Gene: Ent638_3293: Oligogalacturonate lyase (EC 4.2.2.6)	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -96 score = 5.75768 sequence = AAATGAAACATTGTTTCTATA Gene: y1875: Oligogalacturonate lyase (EC 4.2.2.6)	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -180 score = 5.75768 sequence = AAATGAAACATTGTTTCTATA Gene: ECA2426: Oligogalacturonate lyase (EC 4.2.2.6)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Oligogalacturonate lyase (EC 4.2.2.6)
pelW	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -76 score = 5.17457 sequence = GATTGAAACGATGTTTCTATT Site: position = -152 score = 4.4974 sequence = AATCAAAACAACGTTCCGACT Gene: y1885: Exopolygalacturonate lyase (EC 4.2.2.9)	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -61 score = 5.30503 sequence = AATCAAAACAGTGTTTCTATT Site: position = -139 score = 4.4974 sequence = AATCAAAACAACGTTCCGACT Gene: ECA2402: Exopolygalacturonate lyase (EC 4.2.2.9)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Exopolygalacturonate lyase (EC 4.2.2.9)
CRON 11.
kdgX	Escherichia coli str. K-12 substr. MG1655	* Salmonella typhimurium LT2 Site: position = -34 score = 5.84736 sequence = AAATAAAACATTATTTTAATT Gene: STM4395: predicted 2-keto-3-deoxygluconate permease	* Citrobacter koseri ATCC BAA-895 Site: position = -31 score = 5.22305 sequence = AAATAAAACATTATTTCAAAG Gene: CKO_03627: predicted 2-keto-3-deoxygluconate permease	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Enterobacter sp. 638 Site: position = -33 score = 5.85179 sequence = AATTGAAACGTCATTTTATTT Gene: Ent638_0375: predicted 2-keto-3-deoxygluconate permease	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -22 score = 5.76259 sequence = TAACGAAACATCATTTCATTT Gene: y1734: predicted 2-keto-3-deoxygluconate permease	Serratia proteamaculans 568 Gene: Spro_3396: predicted 2-keto-3-deoxygluconate permease	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1684: predicted 2-keto-3-deoxygluconate permease	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	predicted 2-keto-3-deoxygluconate permease
CRON 12.
togT	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -46 score = 5.17095 sequence = TATAAAAACAGTGTTTCAAAA Gene: KPN_02398: Oligogalacturonide transporter	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -25 score = 6.07481 sequence = AAATGAAACATTGTTTTAATT Site: position = -47 score = 4.52273 sequence = AAAGAAAACAGTTATTCATTA Gene: y2961: Oligogalacturonide transporter	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -38 score = 5.49844 sequence = AACTGAAATATTGTTTCATAT Site: position = -60 score = 4.45456 sequence = TAAAGAAATGATAGTTCAATC Gene: ECA0817: Oligogalacturonide transporter	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Oligogalacturonide transporter
CRON 13.
ppsA	* Escherichia coli str. K-12 substr. MG1655 Site: position = -222 score = 5.25789 sequence = TATGAAAACAGCATTTCATTT Gene: b1702: Phosphoenolpyruvate synthase (EC 2.7.9.2)	* Salmonella typhimurium LT2 Site: position = -226 score = 4.85744 sequence = AATGAAAAGTGTGTTTCATTT Gene: STM1349: Phosphoenolpyruvate synthase (EC 2.7.9.2)	* Citrobacter koseri ATCC BAA-895 Site: position = -249 score = 5.46645 sequence = AAATGAAACGCTATTTTTATA Gene: CKO_01725: Phosphoenolpyruvate synthase (EC 2.7.9.2)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -254 score = 5.12755 sequence = AATTGAAACGCTATTTTTGTT Gene: KPN_02160: Phosphoenolpyruvate synthase (EC 2.7.9.2)	* Enterobacter sp. 638 Site: position = -249 score = 5.33969 sequence = AAATGAAATGGTGTTTTTAAT Gene: Ent638_1745: Phosphoenolpyruvate synthase (EC 2.7.9.2)	Erwinia amylovora ATCC 49946 Gene: EAM_1646: Phosphoenolpyruvate synthase (EC 2.7.9.2)	Yersinia pestis KIM Gene: y1930: Phosphoenolpyruvate synthase (EC 2.7.9.2)	* Serratia proteamaculans 568 Site: position = -364 score = 5.16114 sequence = AAgTaAAACAcTaTTTCAaaT Gene: Spro_2174: Phosphoenolpyruvate synthase (EC 2.7.9.2)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -227 score = 5.63269 sequence = TATTAAAACGCCATTTCATTA Gene: ECA1853: Phosphoenolpyruvate synthase (EC 2.7.9.2)	Edwardsiella tarda EIB202 Gene: ETAE_1789: Phosphoenolpyruvate synthase (EC 2.7.9.2)	Proteus mirabilis HI4320 Gene: PMI1421: Phosphoenolpyruvate synthase (EC 2.7.9.2)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu2628: Phosphoenolpyruvate synthase (EC 2.7.9.2)	Phosphoenolpyruvate synthase (EC 2.7.9.2)
CRON 14.
yeeO	* Escherichia coli str. K-12 substr. MG1655 Site: position = -7 score = 4.86337 sequence = ATTTGAAATGTGGTTTCACTT Gene: b1985: predicted multidrug efflux system, MATE family	* Salmonella typhimurium LT2 Site: position = -7 score = 4.99513 sequence = TATTGAAATGTGGTTTCAACT Gene: STM2013: predicted multidrug efflux system, MATE family	* Citrobacter koseri ATCC BAA-895 Site: position = -7 score = 4.86837 sequence = ATTTGAAATGAGGTTTCAACT Gene: CKO_00837: predicted multidrug efflux system, MATE family	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -40 score = 5.14332 sequence = ATTTGAAATGTTGTTTCAACA Gene: KPN_02447: predicted multidrug efflux system, MATE family	* Enterobacter sp. 638 Site: position = -74 score = 4.97321 sequence = ATTTGAAATGTAGTTTCAACT Gene: Ent638_2574: predicted multidrug efflux system, MATE family	Erwinia amylovora ATCC 49946 Gene: EAM_2133: predicted multidrug efflux system, MATE family	* Yersinia pestis KIM Site: position = -158 score = 4.84332 sequence = TCATGAAACTATGTTCCATTT Gene: y2593: predicted multidrug efflux system, MATE family	* Serratia proteamaculans 568 Site: position = -39 score = 5.22936 sequence = ATTTGAAATGTTGTTTCACTT Gene: Spro_3106: predicted multidrug efflux system, MATE family	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -140 score = 5.076 sequence = AATAGAAACGTCATTTTAAAA Gene: ECA2762: predicted multidrug efflux system, MATE family	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	predicted multidrug efflux system, MATE family
CRON 15.
sghX	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y3835: putative exported protein	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -76 score = 4.01687 sequence = TATCACAATAAGGTTCCATTT Site: position = -98 score = 5.58098 sequence = AAATAAAACCTCGTTTCTTTT Gene: ECA0732: putative exported protein	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	putative exported protein
CRON 16.
pehN	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638 Gene: Ent638_2115: putative polygalacturonase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -37 score = 5.69647 sequence = TATTAAAACGATATTTCATTA Gene: ECA1190: putative polygalacturonase	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	putative polygalacturonase
CRON 17.
rhiA	Escherichia coli str. K-12 substr. MG1655	* Salmonella typhimurium LT2 Site: position = -126 score = 4.71378 sequence = ATGTGAAACAGGGTTTCAAAA Gene: STM4054: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit	* Citrobacter koseri ATCC BAA-895 Site: position = -138 score = 5.08341 sequence = TTTTAAACCATCGTTTCAATT Site: position = -50 score = 4.82111 sequence = AACTAAAACAATGTTTTAACG Gene: CKO_04899: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Enterobacter sp. 638 Site: position = -134 score = 4.5088 sequence = TTTCAAACCATCGTTTCAAAA Site: position = -49 score = 4.79435 sequence = AACTAAAACAACGTTTTAACG Gene: Ent638_3876: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y2585: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -239 score = 5.58887 sequence = ATATAAAACAGCATTTCATAT Gene: ECA0357: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit
rhiB	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2 Gene: STM4053: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit	Citrobacter koseri ATCC BAA-895 Gene: CKO_03566: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638 Gene: Ent638_3875: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y2586: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0356: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit
rhiC	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2 Gene: STM4052: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit	Citrobacter koseri ATCC BAA-895 Gene: CKO_03565: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638 Gene: Ent638_3874: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y2587: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0355: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit
CRON 18.
paeY	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -213 score = 5.12866 sequence = TATTAAAATAACATTTCACTT Gene: ECA3252: pectin acetylesterase	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	pectin acetylesterase
pemA	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -149 score = 5.28647 sequence = AAATGGAATTGCGTTTCATTT Gene: y3757: Putative pectinesterase (EC 3.1.1.11)	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3253: Putative pectinesterase (EC 3.1.1.11)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Putative pectinesterase (EC 3.1.1.11)
CRON 19.
spiX	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -54 score = 5.11535 sequence = AATTGAAATACAGTTTTAAAA Gene: ECA1742: predicted 5-keto-4-deoxyuronate isomerase	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	predicted 5-keto-4-deoxyuronate isomerase
CRON 20.
pykF	* Escherichia coli str. K-12 substr. MG1655 Site: position = -286 score = 4.98824 sequence = TTTTGAAACGCTGTTTTTGTT Gene: b1676: Pyruvate kinase (EC 2.7.1.40)	* Salmonella typhimurium LT2 Site: position = -286 score = 4.68744 sequence = TTTTGAAACAGGGTTTTCATT Gene: STM1378: Pyruvate kinase (EC 2.7.1.40)	* Citrobacter koseri ATCC BAA-895 Site: position = -286 score = 5.02668 sequence = TTTTGAAACGCTGTTTTCATT Gene: CKO_01709: Pyruvate kinase (EC 2.7.1.40)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -285 score = 4.99732 sequence = ATTTGAAACGAGGTTTTTATT Gene: KPN_02133: Pyruvate kinase (EC 2.7.1.40)	* Enterobacter sp. 638 Site: position = -286 score = 5.05786 sequence = TTTTGAAACGCCGTTTCCATT Gene: Ent638_1768: Pyruvate kinase (EC 2.7.1.40)	Erwinia amylovora ATCC 49946 Gene: EAM_1657: Pyruvate kinase (EC 2.7.1.40)	Yersinia pestis KIM Gene: y1944: Pyruvate kinase (EC 2.7.1.40)	* Serratia proteamaculans 568 Site: position = -203 score = 4.07437 sequence = AAtaacAACAcatTTTCATcT Gene: Spro_2187: Pyruvate kinase (EC 2.7.1.40)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -259 score = 5.0609 sequence = ATACGGAACGTCGTTTCAATT Gene: ECA1867: Pyruvate kinase (EC 2.7.1.40)	Edwardsiella tarda EIB202 Gene: ETAE_1850: Pyruvate kinase (EC 2.7.1.40)	Proteus mirabilis HI4320 Gene: PMI1405: Pyruvate kinase (EC 2.7.1.40)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu2613: Pyruvate kinase (EC 2.7.1.40)	Pyruvate kinase (EC 2.7.1.40)
CRON 21.
sotA	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_3234: sugar efflux transporter	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -88 score = 4.97518 sequence = TAATGAAACAAGATTTCTGTT Gene: ECA2730: sugar efflux transporter	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	sugar efflux transporter
CRON 22.
pehA	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_2105: Polygalacturonase (EC 3.2.1.15)	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -152 score = 3.92646 sequence = TATGTAAATGGACTTTTATTA Site: position = -65 score = 3.91853 sequence = AAAGGAAGCGTAATTCCTTTT Site: position = -100 score = 4.30717 sequence = TTCTATAAAAGTGTTTTATTT Gene: ECA1095: Polygalacturonase (EC 3.2.1.15)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Polygalacturonase (EC 3.2.1.15)
CRON 23.
pelF	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -291 score = 4.91898 sequence = TAATGAAACCATGTTTTACCA Gene: ECA3112: Pectate lyase precursor (EC 4.2.2.2)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Pectate lyase precursor (EC 4.2.2.2)
pehX	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3111: Exo-poly-alpha-D-galacturonosidase precursor (EC 3.2.1.82)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Exo-poly-alpha-D-galacturonosidase precursor (EC 3.2.1.82)
CRON 24.
rexZ	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -66 score = 4.40842 sequence = AAATAAATTACCGTTGCGTTA Site: position = -138 score = 5.90557 sequence = TAATAAAACTATGTTTCATTT Gene: ECA4123: transcriptional regulator of exoenzymes	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	transcriptional regulator of exoenzymes
CRON 25.
chmX	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -172 score = 4.54803 sequence = TATTGAAACGTGATTTCTATC Gene: ECA3902: methyl-accepting chemotaxis protein	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	methyl-accepting chemotaxis protein
CRON 26.
kdgT	* Escherichia coli str. K-12 substr. MG1655 Site: position = -140 score = 6.01103 sequence = AAATAAAACAGCGTTTCAATT Gene: b3909: 2-keto-3-deoxygluconate permease	Salmonella typhimurium LT2	*2 Citrobacter koseri ATCC BAA-895 Site: position = -147 score = 5.63978 sequence = AAATGAAACATAGTTTTGTTA Gene: CKO_03092: 2-keto-3-deoxygluconate permease Site: position = -231 score = 5.73285 sequence = AACTAAAACAGTGTTTTATTT Gene: CKO_03757: 2-keto-3-deoxygluconate permease	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Enterobacter sp. 638 Site: position = -232 score = 5.76988 sequence = AACTAAAACATTGTTTTATTT Gene: Ent638_0314: 2-keto-3-deoxygluconate permease	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA4124: 2-keto-3-deoxygluconate permease	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	2-keto-3-deoxygluconate permease
CRON 27.
pelC	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	*3 Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -102 score = 4.52376 sequence = CAATAAACCTTGATTTCATTT Site: position = -289 score = 5.39179 sequence = AAACGAAATATAATTTTATTT Gene: ECA4069: Pectate lyase B precursor (EC 4.2.2.2) Gene: ECA4068: Pectate lyase B precursor (EC 4.2.2.2) Site: position = -77 score = 4.09667 sequence = TGTTGAAACAGCCATTTTATT Site: position = -99 score = 4.52589 sequence = AGACAAACCTTAATTTCATTT Site: position = -231 score = 4.21069 sequence = AAATAGAAATCAGTTTCTATT Gene: ECA4067: Pectate lyase B precursor (EC 4.2.2.2)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Pectate lyase B precursor (EC 4.2.2.2)
pelZ	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -2 score = 4.0931 sequence = AAATGAAACGTTCTCTTCTGT Gene: ECA4070: pectate lyase	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	COG3866 Pectate lyase
CRON 28.
pelX	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Enterobacter sp. 638 Site: position = -60 score = 5.67677 sequence = AAAAGAAACGACGTTTCATCT Site: position = -102 score = 5.23501 sequence = AAGCAAAACAACGTTTTAATT Gene: Ent638_4134: Pectate disaccharide-lyase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -66 score = 5.96787 sequence = AAAAGAAACAGCGTTTCATTT Site: position = -113 score = 4.19447 sequence = ATAAAAAACAGACTTTATTTT Site: position = -130 score = 5.30977 sequence = AAATGACACGGTGTTTCATAA Gene: ECA4510: Pectate disaccharide-lyase	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Pectate disaccharide-lyase
CRON 29.
kdgR	Escherichia coli str. K-12 substr. MG1655 Gene: b1827: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Salmonella typhimurium LT2 Gene: STM1842: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Citrobacter koseri ATCC BAA-895 Gene: CKO_01146: 2-keto-3-deoxy-D-gluconate repressor, IclR family	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -161 score = 5.04145 sequence = AAATGAAACGGTTTTTTGAAT Gene: KPN_02343: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Enterobacter sp. 638 Gene: Ent638_2397: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Erwinia amylovora ATCC 49946	* Yersinia pestis KIM Site: position = -76 score = 4.7252 sequence = AATAAAACCATTGTTCTATTT Gene: y1876: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Serratia proteamaculans 568 Gene: Spro_2122: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2425: 2-keto-3-deoxy-D-gluconate repressor, IclR family	* Edwardsiella tarda EIB202 Site: position = -46 score = 4.75787 sequence = TACTGAAACAGAGGTTCGTTT Gene: ETAE_1567: 2-keto-3-deoxy-D-gluconate repressor, IclR family	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	2-keto-3-deoxy-D-gluconate repressor, IclR family
CRON 30.
ECA2137	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	*2 Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2136: putative exported protein Site: position = -349 score = 5.19474 sequence = AAATGAAACAATGCTTCCTTT Gene: ECA2137: putative exported protein	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	putative exported protein
pelP	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638 Gene: Ent638_0482: Exopolygalacturonate lyase (EC 4.2.2.9)	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y3834: Exopolygalacturonate lyase (EC 4.2.2.9)	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2135: Exopolygalacturonate lyase (EC 4.2.2.9)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Exopolygalacturonate lyase (EC 4.2.2.9)
aslB	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y3226: chondro-6-sulfatase	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043	* Edwardsiella tarda EIB202 Site: position = -70 score = 5.32845 sequence = ATAAGAAACATCGTTTTAAAT Gene: ETAE_2529: chondro-6-sulfatase	Proteus mirabilis HI4320 Gene: PMI2142: chondro-6-sulfatase	Photorhabdus luminescens subsp. laumondii TTO1	chondro-6-sulfatase
ETAE_2528	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y3227: putative sulfatase	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202 Gene: ETAE_2528: putative sulfatase	Proteus mirabilis HI4320 Gene: PMI2143: putative sulfatase	Photorhabdus luminescens subsp. laumondii TTO1	putative sulfatase
ETAE_2527	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y3228: hypothetical protein	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202 Gene: ETAE_2527: hypothetical protein	Proteus mirabilis HI4320 Gene: PMI2144: hypothetical protein	Photorhabdus luminescens subsp. laumondii TTO1	hypothetical protein
kdgM	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -37 score = 5.59943 sequence = AAACGAAATGTCATTTTATTT Site: position = -58 score = 5.75266 sequence = AAATAAAATGATGTTTCATAA Gene: KPN_03267: Oligogalacturonate-specific porin protein KdgM	*2 Enterobacter sp. 638 Site: position = -33 score = 5.41649 sequence = AAACGAAATGACATTTTAATT Site: position = -54 score = 4.91971 sequence = AAATAAAATGCAGTTCCATAA Gene: Ent638_3298: Oligogalacturonate-specific porin protein KdgM Site: position = -304 score = 4.93631 sequence = TCTCAAAACATCATTTCATTT Gene: Ent638_0483: Oligogalacturonate-specific porin protein KdgM	Erwinia amylovora ATCC 49946	*2 Yersinia pestis KIM Site: position = -103 score = 5.40329 sequence = AAATGAAACATTGCTTCTTTT Gene: y1880: Oligogalacturonate-specific porin protein KdgM Site: position = -75 score = 5.74237 sequence = AAATAAAATACTGTTTCATAA Gene: y3833: Oligogalacturonate-specific porin protein KdgM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -153 score = 4.79515 sequence = ATTTGAAACCCTATTTTACTT Gene: ECA2407: Oligogalacturonate-specific porin protein KdgM	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Oligogalacturonate-specific porin protein KdgM
tpfX	Escherichia coli str. K-12 substr. MG1655	* Salmonella typhimurium LT2 Site: position = -231 score = 5.35913 sequence = TTATGAAACATTGTTTCAGAT Gene: STM1931: ThiJ/PfpI-family hypothetical protein	* Citrobacter koseri ATCC BAA-895 Site: position = -199 score = 5.40986 sequence = TTTTGAAATGATGTTTCATAT Gene: CKO_01049: ThiJ/PfpI-family hypothetical protein	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Enterobacter sp. 638 Site: position = -42 score = 5.0274 sequence = GGATGAAACGCTGTTTTAAAT Gene: Ent638_2477: ThiJ/PfpI-family hypothetical protein	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -85 score = 6.13996 sequence = TAATAAAACATCGTTTCATTT Gene: ECA0102: ThiJ/PfpI-family hypothetical protein	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	ThiJ/PfpI-family hypothetical protein
CRON 31.
dhfX	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y0507: putative exported protein	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -32 score = 5.94697 sequence = AAAAGAAACGATGTTTTATTT Gene: ECA3785: putative exported protein	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	putative exported protein
CRON 32.
setC	2 Escherichia coli str. K-12 substr. MG1655 Gene: b2170: lactose/glucose efflux system Gene: b3659: lactose/glucose efflux system	Salmonella typhimurium LT2 Gene: STM2207: lactose/glucose efflux system	Citrobacter koseri ATCC BAA-895 Gene: CKO_00612: lactose/glucose efflux system	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -102 score = 5.00651 sequence = TTTTGAAACGCCTTTTTAATT Gene: KPN_02601: lactose/glucose efflux system	* Enterobacter sp. 638 Site: position = -109 score = 4.91445 sequence = TTTTGAAATGCTATTTTGATT Gene: Ent638_2764: lactose/glucose efflux system	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_3234: lactose/glucose efflux system	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -88 score = 4.97518 sequence = TAATGAAACAAGATTTCTGTT Gene: ECA2730: lactose/glucose efflux system	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	lactose/glucose efflux system
CRON 33.
eda	* Escherichia coli str. K-12 substr. MG1655 Site: position = -359 score = 4.47851 sequence = TATTGGACCGGTGTTTCAAAA Gene: b1850: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	* Salmonella typhimurium LT2 Site: position = -360 score = 4.45176 sequence = TATTGGACCGCCGTTTCAAAA Gene: STM1884: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	* Citrobacter koseri ATCC BAA-895 Site: position = -360 score = 4.51554 sequence = TATTGGACCGTTGTTTCAAAA Gene: CKO_01116: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -361 score = 4.45176 sequence = TATTGGACCGCCGTTTCAAAA Gene: KPN_02365: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	* Enterobacter sp. 638 Site: position = -362 score = 4.47851 sequence = TATTGGACCGCTGTTTCAAAA Gene: Ent638_2419: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Erwinia amylovora ATCC 49946	Yersinia pestis KIM Gene: y2243: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	2 Serratia proteamaculans 568 Gene: Spro_2767: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) Gene: Spro_4500: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2478: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Edwardsiella tarda EIB202 Gene: ETAE_1452: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Proteus mirabilis HI4320 Gene: PMI2761: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)	Photorhabdus luminescens subsp. laumondii TTO1	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)

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