Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing togB gene

Properties
Regulog: KdgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Phylum: Proteobacteria/gamma
Built upon 159 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Enterobacter sp. 638
Position: -226
Score: 5.12819
Sequence: AATTAAAACGCCGTTTTACAA
Locus tag: Ent638_3289
Name: togM
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: Ent638_3290
Name: togN
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: Ent638_3291
Name: togA
Funciton: oligogalacturonide ABC transporter, ATP-binding component
Locus tag: Ent638_3292
Name: togB
Funciton: oligogalacturonide ABC transporter, solute-binding periplasmic protein
Locus tag: Ent638_3293
Name: ogl
Funciton: Oligogalacturonate lyase (EC 4.2.2.6)
togM-togN-togA-togB-ogl -226 5.1 AATTAAAACGCCGTTTTACAA Ent638_3289
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -139
Score: 4.4974
Sequence: AATCAAAACAACGTTCCGACT
Position: -61
Score: 5.30503
Sequence: AATCAAAACAGTGTTTCTATT
Locus tag: ECA2402
Name: pelW
Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
Locus tag: ECA2403
Name: togM
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: ECA2404
Name: togN
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: ECA2405
Name: togA
Funciton: oligogalacturonide ABC transporter, ATP-binding component
Locus tag: ECA2406
Name: togB
Funciton: oligogalacturonide ABC transporter, solute-binding periplasmic protein
pelW-togM-togN-togA-togB -139 4.5 AATCAAAACAACGTTCCGACT ECA2402
-61 5.3 AATCAAAACAGTGTTTCTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -288
Score: 5.04706
Sequence: TTTTGAAACATCGTTTCGACT
Position: -211
Score: 5.64427
Sequence: AATTAAAACGGTGTTTTATAA
Locus tag: KPN_03256
Name: togM
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: KPN_03257
Name: togN
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: KPN_03258
Name: togA
Funciton: oligogalacturonide ABC transporter, ATP-binding component
Locus tag: KPN_03259
Name: togB
Funciton: oligogalacturonide ABC transporter, solute-binding periplasmic protein
togM-togN-togA-togB -288 5 TTTTGAAACATCGTTTCGACT KPN_03256
-211 5.6 AATTAAAACGGTGTTTTATAA
Yersinia pestis KIM
Position: -152
Score: 4.4974
Sequence: AATCAAAACAACGTTCCGACT
Position: -76
Score: 5.17457
Sequence: GATTGAAACGATGTTTCTATT
Locus tag: y1885
Name: pelW
Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
Locus tag: y1884
Name: togM
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: y1883
Name: togN
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: y1882
Name: togA
Funciton: oligogalacturonide ABC transporter, ATP-binding component
Locus tag: y1881
Name: togB
Funciton: oligogalacturonide ABC transporter, solute-binding periplasmic protein
pelW-togM-togN-togA-togB -152 4.5 AATCAAAACAACGTTCCGACT y1885
-76 5.2 GATTGAAACGATGTTTCTATT