Profile of regulator KdgR in Enterobacteriales
Properties
| Regulator family: |
IclR |
| Regulation mode: |
repressor (activator) |
| Biological process: |
Pectin and polygalacturonate utlization |
| Effector: |
2-keto-3-deoxygluconate |
| Regulog: |
KdgR - Enterobacteriales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Escherichia coli str. K-12 substr. MG1655
|
|
b3526 |
kdgK |
-86 |
5.3 |
TAATGGAACACTGTTTTAATA |
|
b1702 |
ppsA |
-222 |
5.3 |
TATGAAAACAGCATTTCATTT |
|
b1703 |
ppsR |
-131 |
5.3 |
AAATGAAATGCTGTTTTCATA |
|
b2843 |
kduI |
-63 |
5.4 |
AAACGAAACAGTGTTTCACTA |
|
b2843 |
kduI |
-130 |
6.3 |
AAATGAAACATTGTTTTATTT |
|
b3909 |
kdgT |
-140 |
6 |
AAATAAAACAGCGTTTCAATT |
|
b3090 |
ygjV |
-64 |
5.4 |
ATAAAAAACGGCGTTTCATAA |
|
b1676 |
pykF |
-286 |
5 |
TTTTGAAACGCTGTTTTTGTT |
|
b1985 |
yeeO |
-7 |
4.9 |
ATTTGAAATGTGGTTTCACTT |
|
b4252 |
yjgK |
-35 |
6 |
AAATGAAACGTTGTTTTAATT |
|
b1850 |
eda |
-359 |
4.5 |
TATTGGACCGGTGTTTCAAAA |
|
Salmonella typhimurium LT2
|
|
STM4054 |
rhiA |
-126 |
4.7 |
ATGTGAAACAGGGTTTCAAAA |
|
STM1349 |
ppsA |
-226 |
4.9 |
AATGAAAAGTGTGTTTCATTT |
|
STM1348 |
ppsR |
-131 |
4.9 |
AAATGAAACACACTTTTCATT |
|
STM3018 |
kduI |
-58 |
5.3 |
AATCAAAACAGTGTTTTGATT |
|
STM3018 |
kduI |
-123 |
6.2 |
AAATGAAACGTTGTTTTATTT |
|
STM4395 |
kdgX |
-34 |
5.8 |
AAATAAAACATTATTTTAATT |
|
STM3612 |
kdgK |
-85 |
4.9 |
TAATGGACCGATGTTTTAATA |
|
STM1378 |
pykF |
-286 |
4.7 |
TTTTGAAACAGGGTTTTCATT |
|
STM2013 |
yeeO |
-7 |
5 |
TATTGAAATGTGGTTTCAACT |
|
STM4263 |
yjcB |
-120 |
5.4 |
AATAGAAACAATGTTTCATTC |
|
STM4468 |
yjgK |
-32 |
5.7 |
AAATAAAACGCTGTTTTAACT |
|
STM1884 |
eda |
-360 |
4.5 |
TATTGGACCGCCGTTTCAAAA |
|
STM1931 |
tpfX |
-231 |
5.4 |
TTATGAAACATTGTTTCAGAT |
|
Citrobacter koseri ATCC BAA-895
|
|
CKO_01709 |
pykF |
-286 |
5 |
TTTTGAAACGCTGTTTTCATT |
|
CKO_04968 |
kdgK |
-87 |
5.3 |
TAATGGAACGATGTTTTAATA |
|
CKO_01725 |
ppsA |
-249 |
5.5 |
AAATGAAACGCTATTTTTATA |
|
CKO_01727 |
ppsR |
-107 |
5.5 |
TATAAAAATAGCGTTTCATTT |
|
CKO_04220 |
kduI |
-51 |
4.4 |
AAACGGAACGGTGTTTCGCCT |
|
CKO_04220 |
kduI |
-119 |
6.2 |
AAATGAAACAACGTTTTATTT |
|
CKO_01081 |
rhiT |
-190 |
5.4 |
AATAGAAACGCTGTTTTATAA |
|
CKO_03627 |
kdgX |
-31 |
5.2 |
AAATAAAACATTATTTCAAAG |
|
CKO_04218 |
kdgF |
-38 |
5.6 |
AGTTGAAACATTGTTTCAATA |
|
CKO_01753 |
kduD2 |
-99 |
5.9 |
TTATAAAACACTGTTTCATTT |
|
CKO_03092 |
kdgT |
-147 |
5.6 |
AAATGAAACATAGTTTTGTTA |
|
CKO_00837 |
yeeO |
-7 |
4.9 |
ATTTGAAATGAGGTTTCAACT |
|
CKO_04899 |
rhiA |
-138 |
5.1 |
TTTTAAACCATCGTTTCAATT |
|
CKO_04899 |
rhiA |
-50 |
4.8 |
AACTAAAACAATGTTTTAACG |
|
CKO_03830 |
yjcB |
-121 |
5.1 |
AACAGAAACGTTGTTTCATTC |
|
CKO_03757 |
kdgT |
-231 |
5.7 |
AACTAAAACAGTGTTTTATTT |
|
CKO_03553 |
yjgK |
-33 |
6.2 |
AAATGAAACGTTGTTTTATTT |
|
CKO_01049 |
tpfX |
-199 |
5.4 |
TTTTGAAATGATGTTTCATAT |
|
CKO_01116 |
eda |
-360 |
4.5 |
TATTGGACCGTTGTTTCAAAA |
|
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
|
|
KPN_02133 |
pykF |
-285 |
5 |
ATTTGAAACGAGGTTTTTATT |
|
KPN_03876 |
kdgK |
-87 |
5.3 |
TAATGGAACGATGTTTTAATA |
|
KPN_02160 |
ppsA |
-254 |
5.1 |
AATTGAAACGCTATTTTTGTT |
|
KPN_02161 |
ppsR |
-97 |
5.1 |
AACAAAAATAGCGTTTCAATT |
|
KPN_03265 |
kduD |
-139 |
5.2 |
AAACGGAACTCTGTTTTATTT |
|
KPN_03265 |
kduD |
-207 |
5.8 |
AAATGAAACATCGTTTTAAAT |
|
KPN_03266 |
ogl |
-299 |
5.8 |
ATTTAAAACGATGTTTCATTT |
|
KPN_03256 |
togM |
-211 |
5.6 |
AATTAAAACGGTGTTTTATAA |
|
KPN_03256 |
togM |
-288 |
5 |
TTTTGAAACATCGTTTCGACT |
|
KPN_02390 |
rhiT |
-200 |
4.9 |
AAGAGAAATGCTGTTTTATAA |
|
KPN_03255 |
kdgF |
-39 |
5.8 |
AAATGAAACAATGTTTCACTT |
|
KPN_04658 |
yjgK |
-33 |
5.8 |
AAATGAAATGCTGTTTTATAT |
|
KPN_01240 |
kduD2 |
-104 |
5.8 |
AATCAAAACATTGTTTCATTT |
|
KPN_03267 |
kdgM |
-37 |
5.6 |
AAACGAAATGTCATTTTATTT |
|
KPN_03267 |
kdgM |
-58 |
5.8 |
AAATAAAATGATGTTTCATAA |
|
KPN_02398 |
togT |
-46 |
5.2 |
TATAAAAACAGTGTTTCAAAA |
|
KPN_03266 |
ogl |
-103 |
5.6 |
TAATGAAACAATGTTTTGATA |
|
KPN_02343 |
kdgR |
-161 |
5 |
AAATGAAACGGTTTTTTGAAT |
|
KPN_02447 |
yeeO |
-40 |
5.1 |
ATTTGAAATGTTGTTTCAACA |
|
KPN_04460 |
yjcB |
-113 |
4.9 |
AACAGAAATGGCGTTTCATCA |
|
KPN_02365 |
eda |
-361 |
4.5 |
TATTGGACCGCCGTTTCAAAA |
|
KPN_02601 |
setC |
-102 |
5 |
TTTTGAAACGCCTTTTTAATT |
|
Enterobacter sp. 638
|
|
Ent638_1768 |
pykF |
-286 |
5.1 |
TTTTGAAACGCCGTTTCCATT |
|
Ent638_1745 |
ppsA |
-249 |
5.3 |
AAATGAAATGGTGTTTTTAAT |
|
Ent638_1744 |
ppsR |
-107 |
5.3 |
ATTAAAAACACCATTTCATTT |
|
Ent638_3296 |
kduI |
-60 |
5 |
AATCGGAACATTGTTTCGTTA |
|
Ent638_3296 |
kduI |
-127 |
5.4 |
AACTGAAACAACGTTTTAAAT |
|
Ent638_3297 |
ogl |
-105 |
5 |
CATTGAAACGTCGTTTTGATA |
|
Ent638_3289 |
togM |
-226 |
5.1 |
AATTAAAACGCCGTTTTACAA |
|
Ent638_2444 |
rhiT |
-189 |
5.6 |
AAAAGAAACGCTGTTTTATAA |
|
Ent638_0375 |
kdgX |
-33 |
5.9 |
AATTGAAACGTCATTTTATTT |
|
Ent638_3287 |
kdgF |
-38 |
5.5 |
AATTAAAACAATGTTTCACTA |
|
Ent638_3298 |
kdgM |
-33 |
5.4 |
AAACGAAATGACATTTTAATT |
|
Ent638_3298 |
kdgM |
-54 |
4.9 |
AAATAAAATGCAGTTCCATAA |
|
Ent638_0453 |
yjgK |
-34 |
6 |
AAATGAAACATTGTTTTATAT |
|
Ent638_1716 |
kduD2 |
-94 |
5.6 |
TTTTAAAACATCATTTCATTT |
|
Ent638_3923 |
kdgK |
-84 |
5.1 |
TTATGGAACGACGTTTTAATA |
|
Ent638_2574 |
yeeO |
-74 |
5 |
ATTTGAAATGTAGTTTCAACT |
|
Ent638_3876 |
rhiA |
-134 |
4.5 |
TTTCAAACCATCGTTTCAAAA |
|
Ent638_3876 |
rhiA |
-49 |
4.8 |
AACTAAAACAACGTTTTAACG |
|
Ent638_0314 |
kdgT |
-232 |
5.8 |
AACTAAAACATTGTTTTATTT |
|
Ent638_4134 |
pelX |
-60 |
5.7 |
AAAAGAAACGACGTTTCATCT |
|
Ent638_4134 |
pelX |
-102 |
5.2 |
AAGCAAAACAACGTTTTAATT |
|
Ent638_2764 |
setC |
-109 |
4.9 |
TTTTGAAATGCTATTTTGATT |
|
Ent638_2477 |
tpfX |
-42 |
5 |
GGATGAAACGCTGTTTTAAAT |
|
Ent638_0483 |
kdgM |
-304 |
4.9 |
TCTCAAAACATCATTTCATTT |
|
Ent638_2419 |
eda |
-362 |
4.5 |
TATTGGACCGCTGTTTCAAAA |
|
Yersinia pestis KIM
|
|
y3757 |
pemA |
-149 |
5.3 |
AAATGGAATTGCGTTTCATTT |
|
y1880 |
kdgM |
-103 |
5.4 |
AAATGAAACATTGCTTCTTTT |
|
y1887 |
kduI |
-201 |
6 |
TAATAAAACATCATTTCATTT |
|
y1875 |
ogl |
-96 |
5.8 |
AAATGAAACATTGTTTCTATA |
|
y1885 |
pelW |
-76 |
5.2 |
GATTGAAACGATGTTTCTATT |
|
y1885 |
pelW |
-152 |
4.5 |
AATCAAAACAACGTTCCGACT |
|
y1734 |
kdgX |
-22 |
5.8 |
TAACGAAACATCATTTCATTT |
|
y3838 |
kdgK |
-225 |
5.1 |
ATTTAAAACACCGTTTTAATC |
|
y1888 |
kdgF |
-155 |
6 |
AAATGAAATGATGTTTTATTA |
|
y0739 |
yjgK |
-41 |
5.9 |
TAATAAAACAGCATTTCATTT |
|
y3597 |
ygjV |
-133 |
5.2 |
ATATGAAACGGTGTTCTGTTT |
|
y2961 |
togT |
-25 |
6.1 |
AAATGAAACATTGTTTTAATT |
|
y2961 |
togT |
-47 |
4.5 |
AAAGAAAACAGTTATTCATTA |
|
y2593 |
yeeO |
-158 |
4.8 |
TCATGAAACTATGTTCCATTT |
|
y1876 |
kdgR |
-76 |
4.7 |
AATAAAACCATTGTTCTATTT |
|
y3833 |
kdgM |
-75 |
5.7 |
AAATAAAATACTGTTTCATAA |
|
Serratia proteamaculans 568
|
|
Spro_2173 |
ppsR |
-134 |
5.2 |
ATTTGAAATAGTGTTTTACTT |
|
Spro_4750 |
kdgK |
-105 |
6.2 |
AAATAAAACGTTGTTTTATTT |
|
Spro_3106 |
yeeO |
-39 |
5.2 |
ATTTGAAATGTTGTTTCACTT |
|
Spro_2174 |
ppsA |
-364 |
5.2 |
AAgTaAAACAcTaTTTCAaaT |
|
Spro_2187 |
pykF |
-203 |
4.1 |
AAtaacAACAcatTTTCATcT |
|
Erwinia carotovora subsp. atroseptica SCRI1043
|
|
ECA2730 |
setC |
-88 |
5 |
TAATGAAACAAGATTTCTGTT |
|
ECA1095 |
pehA |
-152 |
3.9 |
TATGTAAATGGACTTTTATTA |
|
ECA4123 |
rexZ |
-66 |
4.4 |
AAATAAATTACCGTTGCGTTA |
|
ECA1867 |
pykF |
-259 |
5.1 |
ATACGGAACGTCGTTTCAATT |
|
ECA1742 |
spiX |
-54 |
5.1 |
AATTGAAATACAGTTTTAAAA |
|
ECA3252 |
paeY |
-213 |
5.1 |
TATTAAAATAACATTTCACTT |
|
ECA1853 |
ppsA |
-227 |
5.6 |
TATTAAAACGCCATTTCATTA |
|
ECA1852 |
ppsR |
-94 |
5.6 |
TAATGAAATGGCGTTTTAATA |
|
ECA2400 |
kduI |
-209 |
6.1 |
AAATAAAACATTATTTCATTT |
|
ECA3902 |
null |
-172 |
4.5 |
TATTGAAACGTGATTTCTATC |
|
ECA4070 |
pelZ |
-2 |
4.1 |
AAATGAAACGTTCTCTTCTGT |
|
ECA4067 |
pelC |
-77 |
4.1 |
TGTTGAAACAGCCATTTTATT |
|
ECA4067 |
pelC |
-99 |
4.5 |
AGACAAACCTTAATTTCATTT |
|
ECA2730 |
sotA |
-88 |
5 |
TAATGAAACAAGATTTCTGTT |
|
ECA4123 |
rexZ |
-138 |
5.9 |
TAATAAAACTATGTTTCATTT |
|
ECA2426 |
ogl |
-180 |
5.8 |
AAATGAAACATTGTTTCTATA |
|
ECA2402 |
pelW |
-61 |
5.3 |
AATCAAAACAGTGTTTCTATT |
|
ECA3560 |
rhiT |
-167 |
4.7 |
AGTTAAAATGCCTTTTTATAA |
|
ECA2402 |
pelW |
-139 |
4.5 |
AATCAAAACAACGTTCCGACT |
|
ECA2399 |
kdgF |
-174 |
6.1 |
AAATGAAATAATGTTTTATTT |
|
ECA4360 |
kdgK |
-125 |
5.4 |
AAATAAAACATCGTTTCAAGA |
|
ECA0383 |
yjgK |
-41 |
5.1 |
TTGTAAAACAGGGTTTCATTT |
|
ECA1095 |
pehA |
-65 |
3.9 |
AAAGGAAGCGTAATTCCTTTT |
|
ECA1095 |
pehA |
-100 |
4.3 |
TTCTATAAAAGTGTTTTATTT |
|
ECA0357 |
rhiA |
-239 |
5.6 |
ATATAAAACAGCATTTCATAT |
|
ECA0817 |
togT |
-38 |
5.5 |
AACTGAAATATTGTTTCATAT |
|
ECA0648 |
ygjV |
-70 |
6.2 |
AAATAAAACGGCGTTTCATTT |
|
ECA0817 |
togT |
-60 |
4.5 |
TAAAGAAATGATAGTTCAATC |
|
ECA0732 |
sghX |
-76 |
4 |
TATCACAATAAGGTTCCATTT |
|
ECA0732 |
sghX |
-98 |
5.6 |
AAATAAAACCTCGTTTCTTTT |
|
ECA2762 |
yeeO |
-140 |
5.1 |
AATAGAAACGTCATTTTAAAA |
|
ECA1190 |
pehN |
-37 |
5.7 |
TATTAAAACGATATTTCATTA |
|
ECA4069 |
pelC |
-102 |
4.5 |
CAATAAACCTTGATTTCATTT |
|
ECA4069 |
pelC |
-289 |
5.4 |
AAACGAAATATAATTTTATTT |
|
ECA3112 |
pelF |
-291 |
4.9 |
TAATGAAACCATGTTTTACCA |
|
ECA4067 |
pelC |
-231 |
4.2 |
AAATAGAAATCAGTTTCTATT |
|
ECA4510 |
pelX |
-66 |
6 |
AAAAGAAACAGCGTTTCATTT |
|
ECA2407 |
kdgM |
-153 |
4.8 |
ATTTGAAACCCTATTTTACTT |
|
ECA4510 |
pelX |
-113 |
4.2 |
ATAAAAAACAGACTTTATTTT |
|
ECA4510 |
pelX |
-130 |
5.3 |
AAATGACACGGTGTTTCATAA |
|
ECA2137 |
ECA2137 |
-349 |
5.2 |
AAATGAAACAATGCTTCCTTT |
|
ECA0102 |
tpfX |
-85 |
6.1 |
TAATAAAACATCGTTTCATTT |
|
ECA3785 |
dhfX |
-32 |
5.9 |
AAAAGAAACGATGTTTTATTT |
|
Edwardsiella tarda EIB202
|
|
ETAE_1898 |
kduI |
-129 |
5.6 |
AATCAAAACAGCATTTCATTT |
|
ETAE_3377 |
kdgK |
-91 |
5.4 |
AAACAGAACGTTGTTTTATTT |
|
ETAE_3112 |
yjgK |
-39 |
5.6 |
AAATAAAACGCAGTTTTATAA |
|
ETAE_1567 |
kdgR |
-46 |
4.8 |
TACTGAAACAGAGGTTCGTTT |
|
ETAE_2529 |
aslB |
-70 |
5.3 |
ATAAGAAACATCGTTTTAAAT |
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|
Regulatory Sites
|
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