Regulon of KdgR in Edwardsiella tarda EIB202

Properties
Regulator type:	Transcription factor
TF locus tag:	ETAE_1567
Regulator family:	IclR
Regulation mode:	repressor (activator)
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Regulog:	KdgR - Enterobacteriales
Statistics of regulated genes:
- Genes	8
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 159 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - KdgR
By TF family - IclR
By effector - 2-keto-3-deoxygluconate
By pathway - Pectin and polygalacturonate utlization

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 5.6 Sequence: AAATAAAACGCAGTTTTATAA Locus tag: ETAE_3112 Name: yjgK Funciton: cytoplasmic protein involved in polygalacturonate utilization
	ETAE_3112	yjgK	cytoplasmic protein involved in polygalacturonate utilization
Position: -91 Score: 5.4 Sequence: AAACAGAACGTTGTTTTATTT Locus tag: ETAE_3377 Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
	ETAE_3377	kdgK	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Position: -129 Score: 5.6 Sequence: AATCAAAACAGCATTTCATTT Locus tag: ETAE_1898 Name: kduI Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) Locus tag: ETAE_1899 Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
	ETAE_1898	kduI	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
	ETAE_1899	kduD	2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Position: -46 Score: 4.8 Sequence: TACTGAAACAGAGGTTCGTTT Locus tag: ETAE_1567 Name: kdgR Funciton: 2-keto-3-deoxy-D-gluconate repressor, IclR family
	ETAE_1567	kdgR	2-keto-3-deoxy-D-gluconate repressor, IclR family
Position: -70 Score: 5.3 Sequence: ATAAGAAACATCGTTTTAAAT Locus tag: ETAE_2529 Name: aslB Funciton: chondro-6-sulfatase Locus tag: ETAE_2528 Name: null Funciton: putative sulfatase Locus tag: ETAE_2527 Name: null Funciton: hypothetical protein
	ETAE_2529	aslB	chondro-6-sulfatase
	ETAE_2528		putative sulfatase
	ETAE_2527		hypothetical protein

Export
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