Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of KdgR in Edwardsiella tarda EIB202

Properties
Regulator type: Transcription factor
TF locus tag: ETAE_1567
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Regulog: KdgR - Enterobacteriales
Statistics of regulated genes:
- Genes 8
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 159 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -39
Score: 5.6
Sequence: AAATAAAACGCAGTTTTATAA
Locus tag: ETAE_3112
Name: yjgK
Funciton: cytoplasmic protein involved in polygalacturonate utilization
yjgK
cytoplasmic protein involved in polygalacturonate utilization

Position: -91
Score: 5.4
Sequence: AAACAGAACGTTGTTTTATTT
Locus tag: ETAE_3377
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
kdgK
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)

Position: -129
Score: 5.6
Sequence: AATCAAAACAGCATTTCATTT
Locus tag: ETAE_1898
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: ETAE_1899
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
kduD
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)

Position: -46
Score: 4.8
Sequence: TACTGAAACAGAGGTTCGTTT
Locus tag: ETAE_1567
Name: kdgR
Funciton: 2-keto-3-deoxy-D-gluconate repressor, IclR family
kdgR
2-keto-3-deoxy-D-gluconate repressor, IclR family

Position: -70
Score: 5.3
Sequence: ATAAGAAACATCGTTTTAAAT
Locus tag: ETAE_2529
Name: aslB
Funciton: chondro-6-sulfatase
Locus tag: ETAE_2528
Name: null
Funciton: putative sulfatase
Locus tag: ETAE_2527
Name: null
Funciton: hypothetical protein
aslB
chondro-6-sulfatase
putative sulfatase
hypothetical protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD