Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of KdgR in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b1827
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Regulog: KdgR - Enterobacteriales
Statistics of regulated genes:
- Genes 11
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 159 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -86
Score: 5.3
Sequence: TAATGGAACACTGTTTTAATA
Locus tag: b3526
Name: kdgK
Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
b3526
kdgK
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Position: -131
Score: 5.3
Sequence: AAATGAAATGCTGTTTTCATA
Locus tag: b1703
Name: ppsR
Funciton: PEP synthetase regulatory protein
b1703
ppsR
PEP synthetase regulatory protein
Position: -7
Score: 4.9
Sequence: ATTTGAAATGTGGTTTCACTT
Locus tag: b1985
Name: yeeO
Funciton: predicted multidrug efflux system, MATE family
b1985
yeeO
predicted multidrug efflux system, MATE family
Position: -222
Score: 5.3
Sequence: TATGAAAACAGCATTTCATTT
Locus tag: b1702
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
b1702
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -140
Score: 6
Sequence: AAATAAAACAGCGTTTCAATT
Locus tag: b3909
Name: kdgT
Funciton: 2-keto-3-deoxygluconate permease
b3909
kdgT
2-keto-3-deoxygluconate permease
Position: -64
Score: 5.4
Sequence: ATAAAAAACGGCGTTTCATAA
Locus tag: b3090
Name: ygjV
Funciton: putative transport protein
b3090
ygjV
putative transport protein
Position: -35
Score: 6
Sequence: AAATGAAACGTTGTTTTAATT
Locus tag: b4252
Name: yjgK
Funciton: cytoplasmic protein involved in polygalacturonate utilization
b4252
yjgK
cytoplasmic protein involved in polygalacturonate utilization
Position: -286
Score: 5
Sequence: TTTTGAAACGCTGTTTTTGTT
Locus tag: b1676
Name: pykF
Funciton: Pyruvate kinase (EC 2.7.1.40)
b1676
pykF
Pyruvate kinase (EC 2.7.1.40)
Position: -130
Score: 6.3
Sequence: AAATGAAACATTGTTTTATTT
Position: -63
Score: 5.4
Sequence: AAACGAAACAGTGTTTCACTA
Locus tag: b2843
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: b2842
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
b2843
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
b2842
kduD
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Position: -359
Score: 4.5
Sequence: TATTGGACCGGTGTTTCAAAA
Locus tag: b1850
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
b1850
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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