Regulon of KdgR in Escherichia coli str. K-12 substr. MG1655
| Regulator type: | Transcription factor |
| TF locus tag: | b1827 |
| Regulator family: | IclR |
| Regulation mode: | repressor (activator) |
| Biological process: | Pectin and polygalacturonate utlization |
| Effector: | 2-keto-3-deoxygluconate |
| Regulog: | KdgR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - KdgR
- By TF family - IclR
- By effector - 2-keto-3-deoxygluconate
- By pathway - Pectin and polygalacturonate utlization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -86
Score: 5.3 Sequence: TAATGGAACACTGTTTTAATA
Locus tag: b3526
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
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kdgK
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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Position: -131
Score: 5.3 Sequence: AAATGAAATGCTGTTTTCATA
Locus tag: b1703
Name: ppsR Funciton: PEP synthetase regulatory protein |
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ppsR
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PEP synthetase regulatory protein
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Position: -7
Score: 4.9 Sequence: ATTTGAAATGTGGTTTCACTT
Locus tag: b1985
Name: yeeO Funciton: predicted multidrug efflux system, MATE family |
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yeeO
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predicted multidrug efflux system, MATE family
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Position: -222
Score: 5.3 Sequence: TATGAAAACAGCATTTCATTT
Locus tag: b1702
Name: ppsA Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2) |
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ppsA
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Phosphoenolpyruvate synthase (EC 2.7.9.2)
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Position: -140
Score: 6 Sequence: AAATAAAACAGCGTTTCAATT
Locus tag: b3909
Name: kdgT Funciton: 2-keto-3-deoxygluconate permease |
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kdgT
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2-keto-3-deoxygluconate permease
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Position: -64
Score: 5.4 Sequence: ATAAAAAACGGCGTTTCATAA
Locus tag: b3090
Name: ygjV Funciton: putative transport protein |
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ygjV
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putative transport protein
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Position: -35
Score: 6 Sequence: AAATGAAACGTTGTTTTAATT
Locus tag: b4252
Name: yjgK Funciton: cytoplasmic protein involved in polygalacturonate utilization |
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yjgK
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cytoplasmic protein involved in polygalacturonate utilization
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Position: -286
Score: 5 Sequence: TTTTGAAACGCTGTTTTTGTT
Locus tag: b1676
Name: pykF Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pykF
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Pyruvate kinase (EC 2.7.1.40)
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Position: -130
Score: 6.3 Sequence: AAATGAAACATTGTTTTATTT
Position: -63
Score: 5.4 Sequence: AAACGAAACAGTGTTTCACTA
Locus tag: b2843
Name: kduI Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: b2842
Name: kduD Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) |
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kduI
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4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
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kduD
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2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
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Position: -359
Score: 4.5 Sequence: TATTGGACCGGTGTTTCAAAA
Locus tag: b1850
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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eda
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |