Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhiN gene

Properties
Regulog: KdgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Phylum: Proteobacteria/gamma
Built upon 159 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -190
Score: 5.41818
Sequence: AATAGAAACGCTGTTTTATAA
Locus tag: CKO_01081
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: CKO_01082
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -190 5.4 AATAGAAACGCTGTTTTATAA CKO_01081
Enterobacter sp. 638
Position: -189
Score: 5.60112
Sequence: AAAAGAAACGCTGTTTTATAA
Locus tag: Ent638_2444
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: Ent638_2443
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -189 5.6 AAAAGAAACGCTGTTTTATAA Ent638_2444
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -167
Score: 4.66061
Sequence: AGTTAAAATGCCTTTTTATAA
Locus tag: ECA3560
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: ECA3559
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -167 4.7 AGTTAAAATGCCTTTTTATAA ECA3560
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -200
Score: 4.94227
Sequence: AAGAGAAATGCTGTTTTATAA
Locus tag: KPN_02390
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: KPN_02389
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -200 4.9 AAGAGAAATGCTGTTTTATAA KPN_02390