Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pelW gene

Properties
Regulog: KdgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Phylum: Proteobacteria/gamma
Built upon 159 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -139
Score: 4.4974
Sequence: AATCAAAACAACGTTCCGACT
Position: -61
Score: 5.30503
Sequence: AATCAAAACAGTGTTTCTATT
Locus tag: ECA2402
Name: pelW
Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
Locus tag: ECA2403
Name: togM
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: ECA2404
Name: togN
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: ECA2405
Name: togA
Funciton: oligogalacturonide ABC transporter, ATP-binding component
Locus tag: ECA2406
Name: togB
Funciton: oligogalacturonide ABC transporter, solute-binding periplasmic protein
pelW-togM-togN-togA-togB -139 4.5 AATCAAAACAACGTTCCGACT ECA2402
-61 5.3 AATCAAAACAGTGTTTCTATT
Yersinia pestis KIM
Position: -152
Score: 4.4974
Sequence: AATCAAAACAACGTTCCGACT
Position: -76
Score: 5.17457
Sequence: GATTGAAACGATGTTTCTATT
Locus tag: y1885
Name: pelW
Funciton: Exopolygalacturonate lyase (EC 4.2.2.9)
Locus tag: y1884
Name: togM
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: y1883
Name: togN
Funciton: oligogalacturonide ABC transporter, inner membrane permease
Locus tag: y1882
Name: togA
Funciton: oligogalacturonide ABC transporter, ATP-binding component
Locus tag: y1881
Name: togB
Funciton: oligogalacturonide ABC transporter, solute-binding periplasmic protein
pelW-togM-togN-togA-togB -152 4.5 AATCAAAACAACGTTCCGACT y1885
-76 5.2 GATTGAAACGATGTTTCTATT