Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog LtbR - Micrococcineae

Properties
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor
Biological process: Leucine biosynthesis
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Arthrobacter aurescens TC1 4 3
Arthrobacter chlorophenolicus A6 4 3
Arthrobacter sp. FB24 4 3
Beutenbergia cavernae DSM 12333 6 3
Brachybacterium faecium DSM 4810 3 2
Brevibacterium linens BL2 7 3
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649 6 3
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201 6 3
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209 4 3
Tropheryma whipplei str. Twist
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ltbR
*
Arthrobacter aurescens TC1

Site:
position = -11
score = 5.55024
sequence = CATCTCAGATATTGAGACG

Gene: AAur_2487: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
*
Arthrobacter chlorophenolicus A6

Site:
position = -32
score = 5.63523
sequence = CATCTCAGATAATGAGACG

Gene: Achl_2257: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
*
Arthrobacter sp. FB24

Site:
position = -32
score = 5.55024
sequence = CATCTCAGATATTGAGACG

Gene: Arth_2520: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
*
Beutenbergia cavernae DSM 12333

Site:
position = -32
score = 5.68432
sequence = CGTCTCATGGTGCGAGACG

Gene: Bcav_1572: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
*
Brachybacterium faecium DSM 4810

Site:
position = -32
score = 5.08412
sequence = CGTCTCACAAAACAAGACG

Gene: Bfae_18570: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
*
Brevibacterium linens BL2

Site:
position = -34
score = 4.7886
sequence = CATCTCGCCCACTGAGACG

Gene: BlinB01001039: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382
*
Janibacter sp. HTCC2649

Site:
position = -32
score = 5.41571
sequence = CGTCTCACGGCTTGGGACG

Gene: JNB_19473: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
 
Jonesia denitrificans DSM 20603

Gene: Jden_1686: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
*
Kocuria rhizophila DC2201

Site:
position = -32
score = 5.06874
sequence = CTTCTCGCATTTTGAGACT

Gene: KRH_10310: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -32
score = 5.83023
sequence = CATCTCATATTCTGAGACG

Gene: RSal33209_1791: Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
 
Tropheryma whipplei str. Twist
Leucine and tryptophan biosynthesis transcriptional regulator LtbR, IclR family
 
CRON 2.
ilvB
 
Arthrobacter aurescens TC1

Gene: AAur_2509: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2279: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Arthrobacter sp. FB24

Gene: Arth_2539: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Beutenbergia cavernae DSM 12333

Site:
position = -222
score = 4.92379
sequence = GGTCCCAGGATGCGAGACG

Gene: Bcav_1408: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_18810: Acetolactate synthase large subunit (EC 2.2.1.6)
*2
Brevibacterium linens BL2

Gene: BlinB01001177: Acetolactate synthase large subunit (EC 2.2.1.6)

Site:
position = -215
score = 5.03079
sequence = AGTCCCATTCTGCGAGACG

Gene: BlinB01001178: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1094: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Janibacter sp. HTCC2649

Site:
position = -253
score = 4.42776
sequence = CGTCTCACACGTTGACACA

Gene: JNB_19268: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1710: Acetolactate synthase large subunit (EC 2.2.1.6)
*
Kocuria rhizophila DC2201

Site:
position = -283
score = 5.33587
sequence = GGTTTCACGATGTGAGACG

Gene: KRH_10210: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx13200: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1043: Acetolactate synthase large subunit (EC 2.2.1.6)
 
Tropheryma whipplei str. Twist

Gene: TW205: Acetolactate synthase large subunit (EC 2.2.1.6)
Acetolactate synthase large subunit (EC 2.2.1.6)
ilvN
 
Arthrobacter aurescens TC1

Gene: AAur_2508: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2278: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Arthrobacter sp. FB24

Gene: Arth_2538: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1409: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_18800: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Brevibacterium linens BL2

Gene: BlinB01001176: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1095: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Janibacter sp. HTCC2649

Gene: JNB_19273: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1709: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Kocuria rhizophila DC2201

Gene: KRH_10220: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx13180: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1044: Acetolactate synthase small subunit (EC 2.2.1.6)
 
Tropheryma whipplei str. Twist

Gene: TW206: Acetolactate synthase small subunit (EC 2.2.1.6)
Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC
 
Arthrobacter aurescens TC1

Gene: AAur_2507: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2277: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Arthrobacter sp. FB24

Gene: Arth_2537: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1410: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_18790: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Brevibacterium linens BL2

Gene: BlinB01001175: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1096: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Janibacter sp. HTCC2649

Gene: JNB_19278: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Jonesia denitrificans DSM 20603

Gene: Jden_1708: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Kocuria rhizophila DC2201

Gene: KRH_10230: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Kytococcus sedentarius DSM 20547

Gene: Ksed_09880: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx13170: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1045: Ketol-acid reductoisomerase (EC 1.1.1.86)
 
Tropheryma whipplei str. Twist

Gene: TW207: Ketol-acid reductoisomerase (EC 1.1.1.86)
Ketol-acid reductoisomerase (EC 1.1.1.86)
 
CRON 3.
PF00324
*
Arthrobacter aurescens TC1

Site:
position = -93
score = 4.99433
sequence = CGTCTCACTATCTGGGATA

Gene: AAur_3061: Predicted amino acid permease
*
Arthrobacter chlorophenolicus A6

Site:
position = -92
score = 5.37329
sequence = CGTCTCACTATTCGGGACG

Gene: Achl_2785: Predicted amino acid permease
*
Arthrobacter sp. FB24

Site:
position = -96
score = 4.68726
sequence = CGTCTCACTATCCGGGATA

Gene: Arth_3085: Predicted amino acid permease
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_2714: Predicted amino acid permease
 
Brachybacterium faecium DSM 4810
 
Brevibacterium linens BL2
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_2650: Predicted amino acid permease
 
Janibacter sp. HTCC2649
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -96
score = 5.52656
sequence = TGTCTCAAGATGTGAGACG

Gene: RSal33209_0843: Predicted amino acid permease
 
Tropheryma whipplei str. Twist
Predicted amino acid permease
 
CRON 4.
leuC
*
Arthrobacter aurescens TC1

Site:
position = -153
score = 5.55024
sequence = CGTCTCAATATCTGAGATG

Gene: AAur_2486: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Arthrobacter chlorophenolicus A6

Site:
position = -100
score = 5.63523
sequence = CGTCTCATTATCTGAGATG

Gene: Achl_2256: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Arthrobacter sp. FB24

Site:
position = -99
score = 5.55024
sequence = CGTCTCAATATCTGAGATG

Gene: Arth_2519: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Beutenbergia cavernae DSM 12333

Site:
position = -89
score = 5.68432
sequence = CGTCTCGCACCATGAGACG

Gene: Bcav_1573: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Brachybacterium faecium DSM 4810

Site:
position = -129
score = 5.08412
sequence = CGTCTTGTTTTGTGAGACG

Gene: Bfae_18560: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Brevibacterium linens BL2

Site:
position = -183
score = 4.7886
sequence = CGTCTCAGTGGGCGAGATG

Gene: BlinB01001040: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1341: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Janibacter sp. HTCC2649

Site:
position = -104
score = 5.41571
sequence = CGTCCCAAGCCGTGAGACG

Gene: JNB_19478: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Jonesia denitrificans DSM 20603
*
Kocuria rhizophila DC2201

Site:
position = -138
score = 5.06874
sequence = AGTCTCAAAATGCGAGAAG

Gene: KRH_10320: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx09660: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
*
Renibacterium salmoninarum ATCC 33209

Site:
position = -86
score = 5.83023
sequence = CGTCTCAGAATATGAGATG

Gene: RSal33209_1790: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
 
Tropheryma whipplei str. Twist
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
leuD
 
Arthrobacter aurescens TC1

Gene: AAur_2485: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Arthrobacter chlorophenolicus A6

Gene: Achl_2255: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Arthrobacter sp. FB24

Gene: Arth_2518: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Beutenbergia cavernae DSM 12333

Gene: Bcav_1574: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Brachybacterium faecium DSM 4810

Gene: Bfae_18550: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Brevibacterium linens BL2

Gene: BlinB01001041: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Clavibacter michiganensis subsp. michiganensis NCPPB 382

Gene: CMM_1342: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Janibacter sp. HTCC2649

Gene: JNB_19483: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Jonesia denitrificans DSM 20603
 
Kocuria rhizophila DC2201

Gene: KRH_10330: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Kytococcus sedentarius DSM 20547
 
Leifsonia xyli subsp. xyli str. CTCB07

Gene: Lxx09680: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Renibacterium salmoninarum ATCC 33209

Gene: RSal33209_1789: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
 
Tropheryma whipplei str. Twist
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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