Regulog KipR - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	IclR
Regulation mode:	repressor
Biological process:	Sporulation
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - IclR
By pathway - Sporulation

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	7	1
Bacillus amyloliquefaciens FZB42	7	1
Bacillus pumilus SAFR-032	6	1
Bacillus licheniformis DSM 13	7	1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426	5	1
Bacillus cereus ATCC 14579	7	1
Bacillus halodurans C-125	2	1
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
kipR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU04100: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_004330: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	Bacillus pumilus SAFR-032 Gene: BPUM_0384: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	Bacillus licheniformis DSM 13 Gene: BLi00503: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -26 score = 5.42456 sequence = ATTCTGATATTCGGAAC Gene: GK1499: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	* Bacillus cereus ATCC 14579 Site: position = -31 score = 6.11853 sequence = GTTCCGTAATTCGGAAC Site: position = -52 score = 5.21085 sequence = GTTTCGAAAAACGGAAT Gene: BC3069: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	Bacillus halodurans C-125 Gene: BH1819: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family
kipI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU04080: Kinase A inhibitor	Bacillus amyloliquefaciens FZB42 Gene: RBAM_004310: Kinase A inhibitor	Bacillus pumilus SAFR-032 Gene: BPUM_0382: Kinase A inhibitor	Bacillus licheniformis DSM 13 Gene: BLi00501: Kinase A inhibitor	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1500: Kinase A inhibitor	Bacillus cereus ATCC 14579 Gene: BC3068: Kinase A inhibitor	* Bacillus halodurans C-125 Site: position = -80 score = 5.42456 sequence = ATTCTGAATATCGGAAC Gene: BH1817: Kinase A inhibitor	Bacillus clausii KSM-K16 Gene: ABC3773: Kinase A inhibitor	Oceanobacillus iheyensis HTE831 Gene: OB2678: Kinase A inhibitor	Paenibacillus sp. JDR-2	Kinase A inhibitor
kipA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU04090: Putative hydrolase subunit antagonist of KipI	Bacillus amyloliquefaciens FZB42 Gene: RBAM_004320: Putative hydrolase subunit antagonist of KipI	Bacillus pumilus SAFR-032 Gene: BPUM_0383: Putative hydrolase subunit antagonist of KipI	Bacillus licheniformis DSM 13 Gene: BLi00502: Putative hydrolase subunit antagonist of KipI	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1501: Putative hydrolase subunit antagonist of KipI	Bacillus cereus ATCC 14579 Gene: BC3067: Putative hydrolase subunit antagonist of KipI	Bacillus halodurans C-125 Gene: BH1818: Putative hydrolase subunit antagonist of KipI	Bacillus clausii KSM-K16 Gene: ABC3772: Putative hydrolase subunit antagonist of KipI	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1373: Putative hydrolase subunit antagonist of KipI	Putative hydrolase subunit antagonist of KipI
ycsF	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -63 score = 5.9726 sequence = GTTCCGAATTTCGGGAC Site: position = -84 score = 4.89773 sequence = GTTCAAAAATTCGGAAT Gene: BSU04050: Lactam utilization protein	* Bacillus amyloliquefaciens FZB42 Site: position = -56 score = 5.47104 sequence = ATTCCGAATAGCGGAAT Gene: RBAM_004280: Lactam utilization protein	* Bacillus pumilus SAFR-032 Site: position = -33 score = 6.0471 sequence = GTTCCGTTATTCGGAAC Gene: BPUM_0379: Lactam utilization protein	* Bacillus licheniformis DSM 13 Site: position = -75 score = 6.26081 sequence = GTTCCGAAAATCGGAAC Gene: BLi00498: Lactam utilization protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1502: Lactam utilization protein	Bacillus cereus ATCC 14579 Gene: BC3066: Lactam utilization protein	Bacillus halodurans C-125 Gene: BH1821: Lactam utilization protein	Bacillus clausii KSM-K16 Gene: ABC3770: Lactam utilization protein	Oceanobacillus iheyensis HTE831 Gene: OB2677: Lactam utilization protein	Paenibacillus sp. JDR-2 Gene: Pjdr2_1374: Lactam utilization protein	Lactam utilization protein
BC3065	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3065: Predicted permease	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted permease
BC3064	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3064: Predicted permease	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted permease
pcp	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU02650: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002960: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi03263: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3063: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Bacillus halodurans C-125 Gene: BH3631: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Bacillus clausii KSM-K16 Gene: ABC3089: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Oceanobacillus iheyensis HTE831 Gene: OB2539: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Paenibacillus sp. JDR-2	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
ycsG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU04060: Mn2+/Fe2+ transporter, NRAMP family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_004290: Mn2+/Fe2+ transporter, NRAMP family	Bacillus pumilus SAFR-032 Gene: BPUM_0380: Mn2+/Fe2+ transporter, NRAMP family	Bacillus licheniformis DSM 13 Gene: BLi00499: Mn2+/Fe2+ transporter, NRAMP family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1820: Mn2+/Fe2+ transporter, NRAMP family	Bacillus clausii KSM-K16 Gene: ABC3771: Mn2+/Fe2+ transporter, NRAMP family	Oceanobacillus iheyensis HTE831 Gene: OB2679: Mn2+/Fe2+ transporter, NRAMP family	Paenibacillus sp. JDR-2	Mn2+/Fe2+ transporter, NRAMP family
ycsI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU04070: Hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_004300: Hypothetical protein	Bacillus pumilus SAFR-032 Gene: BPUM_0381: Hypothetical protein	Bacillus licheniformis DSM 13 Gene: BLi00500: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK2103: Hypothetical protein	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB3382: Hypothetical protein	Paenibacillus sp. JDR-2	Hypothetical protein
lipC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU04110: Lipolytic enzyme located in spore coat	Bacillus amyloliquefaciens FZB42 Gene: RBAM_004340: Lipolytic enzyme located in spore coat	Bacillus pumilus SAFR-032 Gene: BPUM_0386: Lipolytic enzyme located in spore coat	Bacillus licheniformis DSM 13 Gene: BLi00504: Lipolytic enzyme located in spore coat	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC4123: Lipolytic enzyme located in spore coat	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0520: Lipolytic enzyme located in spore coat	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Lipolytic enzyme located in spore coat
GK1503	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1503: Hypothetical protein	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog KipR - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --