Profile of regulator HmgR in Pseudomonadaceae
Properties
| Regulator family: |
IclR |
| Regulation mode: |
repressor |
| Biological process: |
Tyrosine degradation |
| Effector: |
Homogentisate |
| Regulog: |
HmgR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA2010 |
hmgR |
-86 |
6.2 |
ATCGTAATTCAATTACGCA |
|
PA2009 |
hmgA |
-93 |
6.2 |
TGCGTAATTGAATTACGAT |
|
Pseudomonas entomophila L48
|
|
PSEEN4613 |
hmgR |
-92 |
6.4 |
ATCGTAATCAGATTACGAA |
|
PSEEN4612 |
hmgA |
-116 |
6.4 |
TTCGTAATCTGATTACGAT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_0966 |
hmgR |
-70 |
5 |
AACGTAATTTGATTGCCCA |
|
PFL_0966 |
hmgR |
-90 |
6.3 |
ATCGTAATCCAATTACGCA |
|
PFL_0967 |
hmgA |
-96 |
6.3 |
TGCGTAATTGGATTACGAT |
|
Pseudomonas putida KT2440
|
|
PP4621 |
hmgA |
-42 |
6.4 |
TTCGTAATCTGATTACGAT |
|
PP4622 |
hmgR |
-89 |
6.4 |
ATCGTAATCAGATTACGAA |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3554 |
hmgB |
-62 |
4.7 |
TGCGTAATGTGGTTACAAA |
|
PSPTO3551 |
hmgA |
-63 |
5.5 |
TGCGTAATTGTTTTACGAT |
|
PSPTO3552 |
hmgR |
-84 |
5.5 |
ATCGTAAAACAATTACGCA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
