Regulon of TPP in Corynebacterium efficiens YS-314

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Corynebacteriaceae
Under regulation:
- Genes	12
- Operons	4

Member of regulog collections

By taxonomy - Corynebacteriaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: 100 Score: 57.4 Sequence: CGGCAGTCCCCACGG... Locus tag: CE1407 Name: thiC Funciton: Phosphomethylpyrimidine synthase
	CE1407	thiC	Phosphomethylpyrimidine synthase
Position: -113 Score: 51.5 Sequence: CCAACCCCCACGGGC... Locus tag: CE1933 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: CE1934 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: CE1935 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: CE1936 Name: thiG Funciton: Thiazole synthase Locus tag: CE1937 Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
	CE1933	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	CE1934	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	CE1935	thiS	Sulfur carrier protein ThiS
	CE1936	thiG	Thiazole synthase
	CE1937	thiF	Sulfur carrier protein adenylyltransferase ThiF
Position: -95 Score: 55.5 Sequence: AGAACCAGGCACGGG... Locus tag: CE1592 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: CE1591 Name: thiED-tenA Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2)
	CE1592	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	CE1591	thiED-tenA	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2)
Position: -98 Score: 60.6 Sequence: CGATATTGCACGGGT... Locus tag: CE1134 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: CE1135 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: CE1136 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: CE1137 Name: hmpK Funciton: predicted hydroxymethylpyrimidine kinase
	CE1134	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	CE1135	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	CE1136	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	CE1137	hmpK	predicted hydroxymethylpyrimidine kinase

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD