Regulog yybP-ykoY - Corynebacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | yybP-ykoY |
| RFAM: | RF00080 |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - yybP-ykoY
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium glutamicum ATCC 13032 | 4 | 3 |
| Corynebacterium efficiens YS-314 | 1 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | 1 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 1 | 1 |
| Corynebacterium jeikeium K411 | 1 | 1 |
| Corynebacterium urealyticum DSM 7109 | 1 | 1 |
| Corynebacterium amycolatum SK46 | 1 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 1 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| ykoY |
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Corynebacterium glutamicum ATCC 13032 Site: position = -204 score = 47.6 sequence = TTCCCGTATTGGAGG... Gene: cg2157: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium efficiens YS-314 Site: position = -178 score = 52.57 sequence = CTTTCGTAATGGAGG... Gene: CE1859: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium diphtheriae NCTC 13129 Site: position = -195 score = 49.92 sequence = GACTGTAGTTGGAGG... Gene: DIP1460: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium aurimucosum ATCC 700975 Site: position = -163 score = 53.27 sequence = GACGAGTCTTGGAGG... Gene: cauri_1511: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium jeikeium K411 Site: position = -186 score = 49.65 sequence = GTCGGCAGTTGGAGG... Gene: jk1125: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium urealyticum DSM 7109 Site: position = -178 score = 48.23 sequence = CACTTGATGGAGGGG... Gene: cur_0865: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium amycolatum SK46 Site: position = -164 score = 48.9 sequence = CGGCACACGTGGAGG... Gene: CORAM0001_0829: Membrane protein TerC, possibly involved in tellurium resistance |
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Corynebacterium kroppenstedtii DSM 44385 Site: position = -258 score = 37.72 sequence = TCTAGTAGCTGGAGG... Gene: ckrop_1121: Membrane protein TerC, possibly involved in tellurium resistance |
Membrane protein TerC, possibly involved in tellurium resistance |
| CRON 2. | |||||||||
| COG1971 |
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Corynebacterium glutamicum ATCC 13032 Site: position = -216 score = 44.96 sequence = TCCATTTCGAAGGGG... Gene: cg1660: Putative membrane protein |
Gene: CE1598: Putative membrane protein |
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Putative membrane protein |
| CRON 3. | |||||||||
| COG0530 |
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Corynebacterium glutamicum ATCC 13032 Site: position = -138 score = 53.01 sequence = GTCTGTTGCTGAAGG... Gene: cg2785: Sodium/calcium exchanger family membrane protein, COG0530 |
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Sodium/calcium exchanger family membrane protein, COG0530 |
| COG1321 |
Gene: cg2784: Transcriptional regulator, COG1321 |
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Transcriptional regulator, COG1321 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |