Regulog PctR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - RpiR
- By pathway - Phosphonate utilization
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium aurimucosum ATCC 700975 | ||
| Corynebacterium diphtheriae NCTC 13129 | ||
| Corynebacterium efficiens YS-314 | ||
| Corynebacterium glutamicum ATCC 13032 | 6 | 1 |
| Corynebacterium jeikeium K411 | ||
| Corynebacterium kroppenstedtii DSM 44385 | ||
| Corynebacterium urealyticum DSM 7109 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| pctH |
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Corynebacterium glutamicum ATCC 13032 Site: position = 3 score = 6.06888 sequence = ATGAACGCATCGTCCAT Gene: cg1653: Predicted phosphonate hydrolase |
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Predicted phosphonate hydrolase |
| pctA |
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Gene: cg1652: Phosphonate ABC transporter, substrate-binding protein |
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Phosphonate ABC transporter, substrate-binding protein |
| pctB |
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Gene: cg1651: Phosphonate ABC transporter, ATP-binding protein |
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Phosphonate ABC transporter, ATP-binding protein |
| pctC |
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Gene: cg1650: Phosphonate ABC transporter, permease protein 1 |
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Phosphonate ABC transporter, permease protein 1 |
| pctD |
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Gene: cg1649: Phosphonate ABC transporter, permease protein 2 |
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Phosphonate ABC transporter, permease protein 2 |
| pctR |
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Gene: cg1648: Predicted phosphonate utilization transcriptional regulator PctR, RpiR family |
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Predicted phosphonate utilization transcriptional regulator PctR, RpiR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |