Regulog ArsR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Arsenic resistance |
| Effector: | Arsenite; Arsenate |
| Phylum: | Actinobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - ArsR
- By effector - Arsenite
- By effector - Arsenate
- By pathway - Arsenic resistance
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium aurimucosum ATCC 700975 | 2 | 2 |
| Corynebacterium diphtheriae NCTC 13129 | ||
| Corynebacterium efficiens YS-314 | 2 | 2 |
| Corynebacterium glutamicum ATCC 13032 | 6 | 4 |
| Corynebacterium jeikeium K411 | 3 | 2 |
| Corynebacterium kroppenstedtii DSM 44385 | ||
| Corynebacterium urealyticum DSM 7109 | 3 | 2 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| arsR |
|
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -56 score = 6.10919 sequence = GTATTGATGCGCGTCAATAT Gene: cauri_1870: Arsenic resistance transcriptional regulator ArsR, ArsR family |
|
*
Corynebacterium efficiens YS-314 Site: position = 30 score = 5.88927 sequence = GTATTGATTGTTATCAATAT Site: position = 64 score = 6.41818 sequence = ATATTGATGACTGTCAATAT Gene: CE0874: Arsenic resistance transcriptional regulator ArsR, ArsR family |
*2
Corynebacterium glutamicum ATCC 13032 Site: position = -65 score = 5.64829 sequence = ATATTGATGTTTGCCGATAT Site: position = -32 score = 5.80434 sequence = ATATCGATGTGCGTCTATAT Gene: cg0317: Arsenic resistance transcriptional regulator ArsR, ArsR family Site: position = -65 score = 6.17272 sequence = ATATTGATACCTGTCGATAT Site: position = -31 score = 6.08436 sequence = ATATCGACATTCGTCAATAT Gene: cg1704: Arsenic resistance transcriptional regulator ArsR, ArsR family |
*
Corynebacterium jeikeium K411 Site: position = -59 score = 6.38994 sequence = ATATTGATGCCTGTCAATAT Site: position = -32 score = 6.30361 sequence = ATATTGATATCTGTCAATAT Gene: jk2006: Arsenic resistance transcriptional regulator ArsR, ArsR family |
|
*
Corynebacterium urealyticum DSM 7109 Site: position = -66 score = 6.04351 sequence = ATATTGATGGTCATCGATAC Site: position = -32 score = 6.13687 sequence = ATATAGATGACCGTCAATAT Gene: cur_0030: Arsenic resistance transcriptional regulator ArsR, ArsR family |
Arsenic resistance transcriptional regulator ArsR, ArsR family |
| CRON 2. | |||||||||
| arsB |
|
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -77 score = 6.10919 sequence = ATATTGACGCGCATCAATAC Gene: cauri_1869: Arsenite efflux membrane protein |
|
*
Corynebacterium efficiens YS-314 Site: position = -36 score = 5.88927 sequence = ATATTGATAACAATCAATAC Site: position = -70 score = 6.41818 sequence = ATATTGACAGTCATCAATAT Gene: CE0875: Arsenite efflux membrane protein |
*2
Corynebacterium glutamicum ATCC 13032 Site: position = -69 score = 6.08436 sequence = ATATTGACGAATGTCGATAT Site: position = -35 score = 6.17272 sequence = ATATCGACAGGTATCAATAT Gene: cg1705: Arsenite efflux membrane protein Site: position = -69 score = 5.80434 sequence = ATATAGACGCACATCGATAT Site: position = -36 score = 5.64829 sequence = ATATCGGCAAACATCAATAT Gene: cg0318: Arsenite efflux membrane protein |
*
Corynebacterium jeikeium K411 Site: position = -94 score = 6.30361 sequence = ATATTGACAGATATCAATAT Site: position = -67 score = 6.38994 sequence = ATATTGACAGGCATCAATAT Gene: jk2005: Arsenite efflux membrane protein |
|
*
Corynebacterium urealyticum DSM 7109 Site: position = -68 score = 6.13687 sequence = ATATTGACGGTCATCTATAT Site: position = -34 score = 6.04351 sequence = GTATCGATGACCATCAATAT Gene: cur_0031: Arsenite efflux membrane protein |
Arsenite efflux membrane protein |
| arsC |
|
Gene: cauri_1082: Arsenate reductase (EC 1.20.4.1) |
|
2
Corynebacterium efficiens YS-314 Gene: CE0876: Arsenate reductase (EC 1.20.4.1) Gene: CE0877: Arsenate reductase (EC 1.20.4.1) |
2
Corynebacterium glutamicum ATCC 13032 Gene: cg0319: Arsenate reductase (EC 1.20.4.1) Gene: cg1706: Arsenate reductase (EC 1.20.4.1) |
Gene: jk2004: Arsenate reductase (EC 1.20.4.1) |
|
Gene: cur_0032: Arsenate reductase (EC 1.20.4.1) |
Arsenate reductase (EC 1.20.4.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |