Regulog L10_leader - Corynebacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | L10_leader |
| RFAM: | RF00557 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - L10_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium glutamicum ATCC 13032 | 2 | 1 |
| Corynebacterium efficiens YS-314 | 2 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | 2 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | ||
| Corynebacterium jeikeium K411 | ||
| Corynebacterium urealyticum DSM 7109 | ||
| Corynebacterium amycolatum SK46 | ||
| Corynebacterium kroppenstedtii DSM 44385 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| rplJ |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -224 score = 25.14 sequence = ATCGAGCTCAAGGTT... Gene: cg0572: 50S ribosomal protein L10 |
*
Corynebacterium efficiens YS-314 Site: position = -239 score = 18.29 sequence = GTTGTATTCAAGGTT... Gene: CE0493: 50S ribosomal protein L10 |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -219 score = 35.66 sequence = AATGATTTCAAGTTT... Gene: DIP0436: 50S ribosomal protein L10 |
Gene: cauri_0364: 50S ribosomal protein L10 |
Gene: jk1849: 50S ribosomal protein L10 |
Gene: cur_0297: 50S ribosomal protein L10 |
Gene: CORAM0001_0156: 50S ribosomal protein L10 |
Gene: ckrop_1860: 50S ribosomal protein L10 |
50S ribosomal protein L10 |
| rplL |
2
Corynebacterium glutamicum ATCC 13032 Gene: cg0573: 50S ribosomal protein L7/L12 Gene: cg0505: 50S ribosomal protein L7/L12 |
2
Corynebacterium efficiens YS-314 Gene: CE0445: 50S ribosomal protein L7/L12 Gene: CE0494: 50S ribosomal protein L7/L12 |
Gene: DIP0437: 50S ribosomal protein L7/L12 |
Gene: cauri_0365: 50S ribosomal protein L7/L12 |
Gene: jk1848: 50S ribosomal protein L7/L12 |
Gene: cur_0298: 50S ribosomal protein L7/L12 |
Gene: CORAM0001_0157: 50S ribosomal protein L7/L12 |
Gene: ckrop_1859: 50S ribosomal protein L7/L12 |
50S ribosomal protein L7/L12 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |