Regulog L10_leader - Corynebacteriaceae

Properties
Regulator type:	RNA regulatory element
Name:	L10_leader
RFAM:	RF00557
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Phylum:	Actinobacteria

Member of regulog collections

By taxonomy - Corynebacteriaceae
By RNA motif - L10_leader
By pathway - Ribosome biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium glutamicum ATCC 13032	2	1
Corynebacterium efficiens YS-314	2	1
Corynebacterium diphtheriae NCTC 13129	2	1
Corynebacterium aurimucosum ATCC 700975
Corynebacterium jeikeium K411
Corynebacterium urealyticum DSM 7109
Corynebacterium amycolatum SK46
Corynebacterium kroppenstedtii DSM 44385

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
rplJ	* Corynebacterium glutamicum ATCC 13032 Site: position = -224 score = 25.14 sequence = ATCGAGCTCAAGGTT... Gene: cg0572: 50S ribosomal protein L10	* Corynebacterium efficiens YS-314 Site: position = -239 score = 18.29 sequence = GTTGTATTCAAGGTT... Gene: CE0493: 50S ribosomal protein L10	* Corynebacterium diphtheriae NCTC 13129 Site: position = -219 score = 35.66 sequence = AATGATTTCAAGTTT... Gene: DIP0436: 50S ribosomal protein L10	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_0364: 50S ribosomal protein L10	Corynebacterium jeikeium K411 Gene: jk1849: 50S ribosomal protein L10	Corynebacterium urealyticum DSM 7109 Gene: cur_0297: 50S ribosomal protein L10	Corynebacterium amycolatum SK46 Gene: CORAM0001_0156: 50S ribosomal protein L10	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_1860: 50S ribosomal protein L10	50S ribosomal protein L10
rplL	2 Corynebacterium glutamicum ATCC 13032 Gene: cg0573: 50S ribosomal protein L7/L12 Gene: cg0505: 50S ribosomal protein L7/L12	2 Corynebacterium efficiens YS-314 Gene: CE0445: 50S ribosomal protein L7/L12 Gene: CE0494: 50S ribosomal protein L7/L12	Corynebacterium diphtheriae NCTC 13129 Gene: DIP0437: 50S ribosomal protein L7/L12	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_0365: 50S ribosomal protein L7/L12	Corynebacterium jeikeium K411 Gene: jk1848: 50S ribosomal protein L7/L12	Corynebacterium urealyticum DSM 7109 Gene: cur_0298: 50S ribosomal protein L7/L12	Corynebacterium amycolatum SK46 Gene: CORAM0001_0157: 50S ribosomal protein L7/L12	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_1859: 50S ribosomal protein L7/L12	50S ribosomal protein L7/L12

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog L10_leader - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --