Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GlxR in Corynebacterium aurimucosum ATCC 700975

Properties
Regulator type: Transcription factor
TF locus tag: cauri_0205
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Energy metabolism; Carbohydrate metabolism
Effector: Cyclic 3',5'-AMP
Regulog: GlxR - Corynebacteriaceae
Statistics of regulated genes:
- Genes 89
- Operons 52
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 562 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -165
Score: 3.4
Sequence: TGTGACCTGTTAGACA
Locus tag: cauri_0202
Name: whiB4
Funciton: Predicted transcriptional regulator, WhiB family
cauri_0202
whiB4
Predicted transcriptional regulator, WhiB family
Position: -130
Score: 3.8
Sequence: AGTGACTAATTACACT
Locus tag: cauri_0205
Name: glxR
Funciton: Carbohydrate and energy metabolism global transcriptional regulator GlxR, Crp family
cauri_0205
glxR
Carbohydrate and energy metabolism global transcriptional regulator GlxR, Crp family
Position: -70
Score: 4
Sequence: TGTGACTTTAACAACA
Locus tag: cauri_2196
Name: qacA
Funciton: Antiseptic resistance protein
cauri_2196
qacA
Antiseptic resistance protein
Position: -223
Score: 4.4
Sequence: TGTGACAAAAGTCTCA
Locus tag: cauri_0257
Name: sdhC
Funciton: Succinate dehydrogenase, cytochrome b subunit (EC 1.3.99.1)
Locus tag: cauri_0258
Name: sdhA
Funciton: Succinate dehydrogenase, flavoprotein subunit (EC 1.3.99.1)
Locus tag: cauri_0259
Name: sdhB
Funciton: Succinate dehydrogenase, iron-sulfur cluster subunit (EC 1.3.99.1)
Locus tag: cauri_0260
Name: cg0448
Funciton: Conserved hypothetical protein
cauri_0257
sdhC
Succinate dehydrogenase, cytochrome b subunit (EC 1.3.99.1)
cauri_0258
sdhA
Succinate dehydrogenase, flavoprotein subunit (EC 1.3.99.1)
cauri_0259
sdhB
Succinate dehydrogenase, iron-sulfur cluster subunit (EC 1.3.99.1)
cauri_0260
cg0448
Conserved hypothetical protein
Position: -195
Score: 4.4
Sequence: TGAGACTTTTGTCACA
Position: -15
Score: 4
Sequence: GGTAACCTAGCTCACA
Locus tag: cauri_0256
Name: ramB
Funciton: Acetate metabolism transcriptional regulator RamB, XRE family
cauri_0256
ramB
Acetate metabolism transcriptional regulator RamB, XRE family
Position: -19
Score: 4
Sequence: TGTGGGAAAGGACACA
Locus tag: cauri_1816
Name: fadD5
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
cauri_1816
fadD5
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -110
Score: 3.8
Sequence: AGTGATAGAACTAACA
Locus tag: cauri_2168
Name: fadA2
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) / Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: cauri_2169
Name: acx
Funciton: Acyl-CoA oxidase 1, peroxisomal (EC 1.3.3.6)
cauri_2168
fadA2
3-ketoacyl-CoA thiolase (EC 2.3.1.16) / Acetyl-CoA acetyltransferase (EC 2.3.1.9)
cauri_2169
acx
Acyl-CoA oxidase 1, peroxisomal (EC 1.3.3.6)
Position: -42
Score: 3.4
Sequence: TGTTCGATAACCCACA
Locus tag: cauri_1236
Name: acn
Funciton: Aconitate hydratase (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
Locus tag: cauri_1235
Name: acnR
Funciton: Aconitase gene transcriptional regulator AcnR, TetR family
cauri_1236
acn
Aconitate hydratase (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
cauri_1235
acnR
Aconitase gene transcriptional regulator AcnR, TetR family
Position: -251
Score: 3.4
Sequence: CGTGTCATTATTCTCA
Locus tag: cauri_0691
Name: whiB1
Funciton: Predicted transcriptional regulator, WhiB family
cauri_0691
whiB1
Predicted transcriptional regulator, WhiB family
Position: -293
Score: 4.1
Sequence: AGTGTCCAAAGTCACT
Position: -175
Score: 3.5
Sequence: GGTGACCTGGATCGCG
Locus tag: cauri_0692
Name: cg0879
Funciton: Conserved hypothetical protein
cauri_0692
cg0879
Conserved hypothetical protein
Position: -72
Score: 3.7
Sequence: TGTGACTCTGCCAACA
Locus tag: cauri_0766
Name: serC
Funciton: Phosphoserine aminotransferase (EC 2.6.1.52)
cauri_0766
serC
Phosphoserine aminotransferase (EC 2.6.1.52)
Position: -147
Score: 4.1
Sequence: TGAGAAAAACCTCACA
Locus tag: cauri_0280
Name: fas-IB
Funciton: Fatty acids acetyl transferase (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61)
cauri_0280
fas-IB
Fatty acids acetyl transferase (EC 2.3.1.38) / Enoyl-[acyl-carrier-protein] reductase of FASI (EC 1.3.1.9) / 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61)
Position: -249
Score: 4
Sequence: TGTGAGGATTTTCACT
Locus tag: cauri_0849
Name: rpf2
Funciton: Cell wall-binding protein
Locus tag: cauri_0850
Name: ksgA
Funciton: Dimethyladenosine transferase (EC 2.1.1.-)
Locus tag: cauri_0851
Name: ispE
Funciton: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)
cauri_0849
rpf2
Cell wall-binding protein
cauri_0850
ksgA
Dimethyladenosine transferase (EC 2.1.1.-)
cauri_0851
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148)
Position: -30
Score: 3.7
Sequence: TGCGACCTTCGTCACG
Locus tag: cauri_0587
Name: cg1142
Funciton: Conserved hypothetical protein
Locus tag: cauri_0588
Name: cg2803
Funciton: Conserved hypothetical protein
cauri_0587
cg1142
Conserved hypothetical protein
cauri_0588
cg2803
Conserved hypothetical protein
Position: -87
Score: 3.6
Sequence: GGTGTGTTTCTTCACT
Locus tag: cauri_1116
Name: pfkA
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
cauri_1116
pfkA
6-phosphofructokinase (EC 2.7.1.11)
Position: -91
Score: 4.2
Sequence: GGTGGCGCGAGTCACA
Locus tag: cauri_0526
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
cauri_0526
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -29
Score: 4.5
Sequence: TGTGATATGGAACACT
Locus tag: cauri_0859
Name: echA3
Funciton: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
cauri_0859
echA3
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
Position: -72
Score: 3.8
Sequence: CGTGATTGAAGACACT
Locus tag: cauri_0770
Name: cg0952
Funciton: Putative membrane protein
Locus tag: cauri_0771
Name: mctC
Funciton: Monocarboxylic acid transporter
cauri_0770
cg0952
Putative membrane protein
cauri_0771
mctC
Monocarboxylic acid transporter
Position: -255
Score: 4.4
Sequence: TGTTAGCTATATCACA
Locus tag: cauri_0759
Name: cspB
Funciton: Cold-shock DNA-binding domain protein
cauri_0759
cspB
Cold-shock DNA-binding domain protein
Position: -189
Score: 3.8
Sequence: AGTGCGTTATCCCACA
Locus tag: cauri_2289
Name: ptsG
Funciton: Glucose-specific PTS system, IIABC component
cauri_2289
ptsG
Glucose-specific PTS system, IIABC component
Position: -240
Score: 4.2
Sequence: TGTGATTTATCTCATT
Locus tag: cauri_1699
Name: ctaE
Funciton: Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Locus tag: cauri_1698
Name: qcrC
Funciton: Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Locus tag: cauri_1697
Name: qcrA
Funciton: Ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC 1.10.2.2)
Locus tag: cauri_1696
Name: qcrB
Funciton: Ubiquinol cytochrome C oxidoreductase, cytochrome B subunit (EC 1.10.2.2)
cauri_1699
ctaE
Cytochrome c oxidase polypeptide III (EC 1.9.3.1)
cauri_1698
qcrC
Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
cauri_1697
qcrA
Ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC 1.10.2.2)
cauri_1696
qcrB
Ubiquinol cytochrome C oxidoreductase, cytochrome B subunit (EC 1.10.2.2)
Position: -35
Score: 3.9
Sequence: CATGATGTATATCACT
Locus tag: cauri_1495
Name: gluA
Funciton: Glutamate ABC transporter, ATP-binding protein
Locus tag: cauri_1496
Name: gluB
Funciton: Glutamate ABC transporter, substrate-binding protein
Locus tag: cauri_1497
Name: gluC
Funciton: Glutamate ABC transporter, permease protein 1
Locus tag: cauri_1498
Name: gluD
Funciton: Glutamate ABC transporter, permease protein 2
cauri_1495
gluA
Glutamate ABC transporter, ATP-binding protein
cauri_1496
gluB
Glutamate ABC transporter, substrate-binding protein
cauri_1497
gluC
Glutamate ABC transporter, permease protein 1
cauri_1498
gluD
Glutamate ABC transporter, permease protein 2
Position: -232
Score: 3.5
Sequence: AGCGTCCGACATCACA
Locus tag: cauri_1478
Name: sugR
Funciton: Sugar metabolism transcriptional regulator SugR, DeoR family
cauri_1478
sugR
Sugar metabolism transcriptional regulator SugR, DeoR family
Position: -64
Score: 3.3
Sequence: TGCGCCCGAATTCACA
Locus tag: cauri_2404
Name: cg3220
Funciton: conserved membrane-spanning protein
cauri_2404
cg3220
conserved membrane-spanning protein
Position: -289
Score: 4.4
Sequence: TGTGATATAGCTAACA
Locus tag: cauri_0758
Name: rpf1
Funciton: Resuscitation-promoting factor Rpf1
cauri_0758
rpf1
Resuscitation-promoting factor Rpf1
Position: -236
Score: 4.6
Sequence: TGTGTTCTAGATCACC
Locus tag: cauri_2108
Name: ctaD
Funciton: Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: cauri_2107
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
Locus tag: cauri_2106
Name: cg2778
Funciton: Putative hydrolase
cauri_2108
ctaD
Cytochrome c oxidase polypeptide I (EC 1.9.3.1)
cauri_2107
serB
Phosphoserine phosphatase (EC 3.1.3.3)
cauri_2106
cg2778
Putative hydrolase
Position: -186
Score: 4
Sequence: CGTGCCTTAATTCACA
Locus tag: cauri_2359
Name: pck
Funciton: Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
cauri_2359
pck
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
Position: -81
Score: 4.1
Sequence: TGTGTCGCCCATCACT
Locus tag: cauri_2317
Name: aldA
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3)
cauri_2317
aldA
Aldehyde dehydrogenase (EC 1.2.1.3)
Position: -67
Score: 3.8
Sequence: TGTGGTGCATGTAACT
Locus tag: cauri_2148
Name: actA
Funciton: Butyryl-CoA:acetate-CoA transferase (EC 2.8.3.8)
cauri_2148
actA
Butyryl-CoA:acetate-CoA transferase (EC 2.8.3.8)
Position: -92
Score: 3.6
Sequence: TGTGAAGTGCAACGCT
Position: -63
Score: 4.1
Sequence: AGTGGTTTGCATCACG
Locus tag: cauri_2063
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming], beta chain (EC 6.2.1.5)
Locus tag: cauri_2062
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming], alpha chain (EC 6.2.1.5)
cauri_2063
sucC
Succinyl-CoA ligase [ADP-forming], beta chain (EC 6.2.1.5)
cauri_2062
sucD
Succinyl-CoA ligase [ADP-forming], alpha chain (EC 6.2.1.5)
Position: -234
Score: 3.4
Sequence: AGTGCGCCGCATTACA
Locus tag: cauri_1720
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
cauri_1720
glnA
Glutamine synthetase type I (EC 6.3.1.2)
Position: -172
Score: 4.3
Sequence: TGTGAATTGGGTCATA
Locus tag: cauri_1701
Name: ctaC
Funciton: Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: cauri_1700
Name: ctaF
Funciton: Cytochrome c oxidase polypeptide IV (EC 1.9.3.1)
cauri_1701
ctaC
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
cauri_1700
ctaF
Cytochrome c oxidase polypeptide IV (EC 1.9.3.1)
Position: -44
Score: 4
Sequence: TGAGCTCTAGATCACC
Locus tag: cauri_0620
Name: gntP
Funciton: Gluconate permease
cauri_0620
gntP
Gluconate permease
Position: -147
Score: 4.3
Sequence: TATGACCCAATTCACA
Locus tag: cauri_1702
Name: ltsA
Funciton: Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
cauri_1702
ltsA
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
Position: -71
Score: 4.5
Sequence: AGTGACTTAATTCACT
Locus tag: cauri_1277
Name: msiK1
Funciton: Maltose/maltodextrin ABC transporter, ATP-binding protein
Locus tag: cauri_1278
Name: cg2707
Funciton: Predicted ATPase
cauri_1277
msiK1
Maltose/maltodextrin ABC transporter, ATP-binding protein
cauri_1278
cg2707
Predicted ATPase
Position: -13
Score: 3.8
Sequence: TGTGAGGTGCCTCATG
Locus tag: cauri_1081
Name: cg2610
Funciton: Predicted ABC transporter, substrate-binding protein
cauri_1081
cg2610
Predicted ABC transporter, substrate-binding protein
Position: -180
Score: 3.8
Sequence: TGTGGGATAACGCACT
Locus tag: cauri_2288
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
Locus tag: cauri_2287
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
cauri_2288
pta
Phosphate acetyltransferase (EC 2.3.1.8)
cauri_2287
ackA
Acetate kinase (EC 2.7.2.1)
Position: -65
Score: 4.4
Sequence: TGTGAGGGAAATCACC
Locus tag: cauri_0563
Name: accD1
Funciton: Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
cauri_0563
accD1
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3)
Position: -47
Score: 3.9
Sequence: TGTGATGCCTATCGCA
Locus tag: cauri_0542
Name: prpD
Funciton: 2-methylcitrate dehydratase (EC 4.2.1.79)
Locus tag: cauri_0543
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: cauri_0544
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
cauri_0542
prpD
2-methylcitrate dehydratase (EC 4.2.1.79)
cauri_0543
prpB
Methylisocitrate lyase (EC 4.1.3.30)
cauri_0544
prpC
2-methylcitrate synthase (EC 2.3.3.5)
Position: -46
Score: 3.6
Sequence: AATGACCCACGTCATA
Locus tag: cauri_0643
Name: gabT2
Funciton: 4-aminobutyrate aminotransferase (EC 2.6.1.19)
Locus tag: cauri_0642
Name: hapE
Funciton: 4-hydroxyacetophenone monooxygenase (EC 1.14.13.84)
Locus tag: cauri_0641
Name: lipN
Funciton: Putative lipase/esterase
cauri_0643
gabT2
4-aminobutyrate aminotransferase (EC 2.6.1.19)
cauri_0642
hapE
4-hydroxyacetophenone monooxygenase (EC 1.14.13.84)
cauri_0641
lipN
Putative lipase/esterase
Position: -56
Score: 3.5
Sequence: GGTGGTAGGGGCCACA
Locus tag: cauri_0646
Name: gabT2
Funciton: 4-aminobutyrate aminotransferase (EC 2.6.1.19)
Locus tag: cauri_0647
Name: gabP
Funciton: Predicted amino acids permease
cauri_0646
gabT2
4-aminobutyrate aminotransferase (EC 2.6.1.19)
cauri_0647
gabP
Predicted amino acids permease
Position: -115
Score: 3.9
Sequence: TGTGACCAAGGTAACC
Locus tag: cauri_1030
Name: putP
Funciton: Sodium/proline symporter
cauri_1030
putP
Sodium/proline symporter
Position: -91
Score: 3.8
Sequence: TGTTAGTTCTATCACT
Position: -1
Score: 4
Sequence: TATGCCGCACGTCACA
Locus tag: cauri_2167
Name: fabG2
Funciton: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
Locus tag: cauri_2166
Name: fas
Funciton: Acyl dehydratase
cauri_2167
fabG2
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
cauri_2166
fas
Acyl dehydratase
Position: -279
Score: 4.1
Sequence: TGTGACCAAGTACACT
Locus tag: cauri_1068
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: cauri_1069
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: cauri_1070
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: cauri_1071
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: cauri_1072
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: cauri_1073
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: cauri_1074
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: cauri_1075
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
cauri_1068
atpB
ATP synthase A chain (EC 3.6.3.14)
cauri_1069
atpE
ATP synthase C chain (EC 3.6.3.14)
cauri_1070
atpF
ATP synthase B chain (EC 3.6.3.14)
cauri_1071
atpH
ATP synthase delta chain (EC 3.6.3.14)
cauri_1072
atpA
ATP synthase alpha chain (EC 3.6.3.14)
cauri_1073
atpG
ATP synthase gamma chain (EC 3.6.3.14)
cauri_1074
atpD
ATP synthase beta chain (EC 3.6.3.14)
cauri_1075
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -115
Score: 4
Sequence: TGTTGTTAAAGTCACA
Locus tag: cauri_2195
Name: pqo
Funciton: Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)
cauri_2195
pqo
Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)
Position: -324
Score: 3.8
Sequence: TGTGCGGATTTTCACA
Locus tag: cauri_2437
Name: dnaB
Funciton: Replicative DNA helicase (EC 3.6.1.-)
cauri_2437
dnaB
Replicative DNA helicase (EC 3.6.1.-)
Position: -95
Score: 3.7
Sequence: TGTTGGCAGAGTCACA
Locus tag: cauri_0767
Name: gltA
Funciton: Citrate synthase (EC 2.3.3.1)
cauri_0767
gltA
Citrate synthase (EC 2.3.3.1)
Position: -81
Score: 3.8
Sequence: AGAGAACTAGCTCTCA
Locus tag: cauri_1654
Name: DIP1662
Funciton: Predicted transcriptional regulator, GntR family
Locus tag: cauri_1655
Name: cg3090
Funciton: Predicted permease, MFS family
cauri_1654
DIP1662
Predicted transcriptional regulator, GntR family
cauri_1655
cg3090
Predicted permease, MFS family
Position: -249
Score: 3.7
Sequence: TGAGAAATAGATCCCA
Locus tag: cauri_1130
Name: ilvB
Funciton: Acetolactate synthase, large subunit (EC 2.2.1.6)
Locus tag: cauri_1131
Name: ilvN
Funciton: Acetolactate synthase, small subunit (EC 2.2.1.6)
Locus tag: cauri_1132
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
cauri_1130
ilvB
Acetolactate synthase, large subunit (EC 2.2.1.6)
cauri_1131
ilvN
Acetolactate synthase, small subunit (EC 2.2.1.6)
cauri_1132
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
Position: -71
Score: 3.4
Sequence: TGTCTAACAGGTCACA
Locus tag: cauri_0201
Name: pbp1B
Funciton: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129)
cauri_0201
pbp1B
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129)
Position: -63
Score: 3.3
Sequence: AGTGCTCTGGGATACA
Locus tag: cauri_0522
Name: ppc
Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
cauri_0522
ppc
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Position: -343
Score: 3.8
Sequence: AGTGAGATATCCCACC
Locus tag: cauri_1200
Name: gap
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
cauri_1200
gap
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise