Regulon of NanR in Corynebacterium kroppenstedtii DSM 44385
| Regulator type: | Transcription factor |
| TF locus tag: | ckrop_1863 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Sialic acid utilization |
| Effector: | N-acetylneuraminic acid |
| Regulog: | NanR - Corynebacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - GntR/Others
- By effector - N-acetylneuraminic acid
- By pathway - Sialic acid utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -72
Score: 5.6 Sequence: ATAGGTTGTAAGACGTCTGAC
Locus tag: ckrop_1865
Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: ckrop_1864
Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) |
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nanK
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N-acetylmannosamine kinase (EC 2.7.1.60)
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nanE
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N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
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Position: -127
Score: 5.5 Sequence: CATGGACGTCAGACGTCTTAC
Locus tag: ckrop_1866
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: ckrop_1869
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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Position: -156
Score: 6.1 Sequence: ATCAGACATCAGACATCTGAC
Position: -149
Score: 5.6 Sequence: ATCAGACATCTGACATGTGGT
Locus tag: ckrop_1872
Name: nanI Funciton: exo-alpha-sialidase |
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nanI
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exo-alpha-sialidase
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Position: -99
Score: 5.5 Sequence: ACCACATGTCAGATGTCTGAT
Position: -92
Score: 6 Sequence: GTCAGATGTCTGATGTCTGAT
Locus tag: ckrop_1873
Name: nanT Funciton: Sialic acid transporter
Locus tag: ckrop_1874
Name: cheA Funciton: Putative chemotaxis protein, resembles cheA |
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nanT
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Sialic acid transporter
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cheA
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Putative chemotaxis protein, resembles cheA
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |