Regulog Cg0454 - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By TF family - TetR
- By pathway - Multidrug resistance
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium amycolatum SK46 | 2 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 2 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | 2 | 1 |
| Corynebacterium efficiens YS-314 | 2 | 1 |
| Corynebacterium glutamicum ATCC 13032 | 3 | 1 |
| Corynebacterium jeikeium K411 | 2 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 2 | 1 |
| Corynebacterium urealyticum DSM 7109 | 2 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| cg0454 |
*
Corynebacterium amycolatum SK46 Site: position = 0 score = 4.14739 sequence = TTGCACCTCGTGCAT Site: position = -17 score = 5.62973 sequence = TTGCACTCGGTGTAA Gene: CORAM0001_0459: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -34 score = 5.41853 sequence = TTGCACTTGGTGCAA Site: position = -17 score = 5.48664 sequence = TTGCACTGGGTGTAG Site: position = 0 score = 5.3278 sequence = TTGCACTCCGTGCAA Gene: cauri_0936: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -20 score = 4.66448 sequence = TTGCACTAGGTTTAC Site: position = -37 score = 4.49039 sequence = TTGCGCTCAGTATAC Gene: DIP0937: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium efficiens YS-314 Site: position = 17 score = 4.66448 sequence = TTGCACTAGGTTTAC Site: position = 0 score = 5.68569 sequence = TTGCACTCGGTGCAA Site: position = -17 score = 4.70001 sequence = CTTCACCCGGTGCAA Gene: CE0397: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -36 score = 5.65956 sequence = TTGCACTGAGTGCAA Site: position = -19 score = 4.02826 sequence = TTACACTAGGTTTAC Site: position = -53 score = 5.12108 sequence = GTTCACTCGGTGCAA Gene: cg0454: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium jeikeium K411 Site: position = -67 score = 5.69434 sequence = TTGCACTGGGTGTAA Site: position = -84 score = 5.18568 sequence = TTGCACTGGATACAA Gene: jk1455: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -9 score = 4.4709 sequence = TTTCACACAATGCAG Site: position = 25 score = 5.45186 sequence = TTGCACTGAGTGCAG Gene: ckrop_0577: Predicted drug resistance transcriptional regulator, TetR family |
*
Corynebacterium urealyticum DSM 7109 Site: position = -42 score = 4.69014 sequence = TTGCATTGCATGCAA Site: position = -25 score = 4.96968 sequence = GTGCACCGAGTGTAA Gene: cur_0611: Predicted drug resistance transcriptional regulator, TetR family |
Predicted drug resistance transcriptional regulator, TetR family |
| cg0455 |
Gene: CORAM0001_0458: Predicted multidrug:H+ antiporter |
Gene: cauri_0935: Predicted multidrug:H+ antiporter |
Gene: DIP0936: Predicted multidrug:H+ antiporter |
Gene: CE0398: Predicted multidrug:H+ antiporter |
2
Corynebacterium glutamicum ATCC 13032 Gene: cg0455: Predicted multidrug:H+ antiporter Gene: cg0456: Predicted multidrug:H+ antiporter |
Gene: jk1456: Predicted multidrug:H+ antiporter |
Gene: ckrop_0576: Predicted multidrug:H+ antiporter |
Gene: cur_0610: Predicted multidrug:H+ antiporter |
Predicted multidrug:H+ antiporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |