Regulon of TPP in Corynebacterium urealyticum DSM 7109
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Corynebacteriaceae |
| Under regulation: | |
| - Genes | 12 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -143
Score: 50.7 Sequence: AATAACGCAAGGGGT...
Locus tag: cur_0377
Name: thiD-tenA Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2) |
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thiD-tenA
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Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiaminase II (EC 3.5.99.2)
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Position: -112
Score: 58 Sequence: TACCGAAATACGGGC...
Locus tag: cur_1103
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: cur_1104
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: cur_1105
Name: cg0121 Funciton: major facilitator superfamily permease
Locus tag: cur_1106
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: cur_1107
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: cur_1108
Name: thiG Funciton: Thiazole synthase
Locus tag: cur_1109
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF |
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thiC
|
Phosphomethylpyrimidine synthase
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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cg0121
|
major facilitator superfamily permease
|
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
|
Sulfur carrier protein ThiS
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thiG
|
Thiazole synthase
|
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thiF
|
Sulfur carrier protein adenylyltransferase ThiF
|
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Position: -108
Score: 37.2 Sequence: CCGACCAACGCGGGA...
Locus tag: cur_0414
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: cur_0415
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: cur_0416
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: cur_0417
Name: hmpK Funciton: predicted hydroxymethylpyrimidine kinase |
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ykoE
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Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoD
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Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
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ykoC
|
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
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hmpK
|
predicted hydroxymethylpyrimidine kinase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |