Regulog T-box(Ile) - Corynebacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ile-tRNA |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Corynebacteriaceae
- By RNA motif - T-box
- By effector - Ile-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium glutamicum ATCC 13032 | 1 | 1 |
| Corynebacterium efficiens YS-314 | 1 | 1 |
| Corynebacterium diphtheriae NCTC 13129 | 1 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 1 | 1 |
| Corynebacterium jeikeium K411 | 1 | 1 |
| Corynebacterium urealyticum DSM 7109 | 1 | 1 |
| Corynebacterium amycolatum SK46 | 1 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 1 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| ileS |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -236 score = 36.21 sequence = GGCGGAGGTTATGAT... Gene: cg2359: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium efficiens YS-314 Site: position = -255 score = 14.97 sequence = GGCGAAGGCGATGAT... Gene: CE2043: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -236 score = 43.29 sequence = ATAGACGACGCTGAT... Gene: DIP1589: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -204 score = 38.6 sequence = GGCGTATGCAGTGAG... Gene: cauri_1656: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium jeikeium K411 Site: position = -269 score = 33.03 sequence = AACACGCATCGATCC... Gene: jk0760: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium urealyticum DSM 7109 Site: position = -131 score = 32.12 sequence = CAAGATAAGAGGAAG... Gene: cur_1195: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium amycolatum SK46 Site: position = -268 score = 32.33 sequence = AATACGCGCAATGAG... Gene: CORAM0001_1097: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -355 score = 36.42 sequence = CGTCCGCTATGATCC... Gene: ckrop_0758: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |