Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog NrdR - Corynebacteriaceae

Properties
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 26 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium amycolatum SK46 3 1
Corynebacterium aurimucosum ATCC 700975 3 1
Corynebacterium diphtheriae NCTC 13129 5 2
Corynebacterium efficiens YS-314 5 2
Corynebacterium glutamicum ATCC 13032 3 1
Corynebacterium jeikeium K411 3 1
Corynebacterium kroppenstedtii DSM 44385 3 1
Corynebacterium urealyticum DSM 7109 6 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
nrdH
*
Corynebacterium amycolatum SK46

Site:
position = -283
score = 4.49
sequence = GTACAACATCTTGTGC

Site:
position = -230
score = 4.49
sequence = GTACTACATCTAGTAT

Site:
position = -198
score = 3.92
sequence = GCACCAAGTGTAGTGT

Gene: CORAM0001_1208: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -180
score = 4.81
sequence = CTACTACATATAGTGC

Site:
position = -148
score = 3.8
sequence = GCACAAAGTATAGTGT

Gene: cauri_2113: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -176
score = 4.71
sequence = CCTCAACATGTAGGGG

Site:
position = -122
score = 4.52
sequence = ATACTAGATATTGTGC

Site:
position = -90
score = 3.99
sequence = CCACAAAGTATAGTGT

Gene: DIP1869: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium efficiens YS-314

Site:
position = -262
score = 4.17
sequence = GCGCAACATGTGGGGG

Site:
position = -209
score = 4.81
sequence = CTACTATATGTAGTGC

Site:
position = -177
score = 3.99
sequence = CCACAAAGTATAGTGT

Gene: CE2425: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -206
score = 4.27
sequence = TCGCTACATGTGGTGG

Site:
position = -153
score = 4.81
sequence = CTACTATATGTAGTGC

Site:
position = -121
score = 3.99
sequence = CCACAAAGTATAGTGT

Gene: cg2789: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium jeikeium K411

Site:
position = -273
score = 3.7
sequence = TGGCTAGATGTAGTGG

Site:
position = -220
score = 4.65
sequence = CTACTAGATATTGTGC

Site:
position = -188
score = 4.33
sequence = CCCCAAAATGTTGTGT

Gene: jk0476: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -202
score = 4.63
sequence = TTACTACATATAGTGG

Gene: ckrop_1413: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
*
Corynebacterium urealyticum DSM 7109

Site:
position = -206
score = 4.67
sequence = GCTCAACATGTAGTGG

Site:
position = -152
score = 5.03
sequence = CCACAATATCTAGTGT

Site:
position = -120
score = 4.11
sequence = GCCCAAAATATTGTGG

Gene: cur_1484: Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib
CE0124
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129
 
Corynebacterium efficiens YS-314
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1483: hypothetical protein
putative membrane protein
nrdI
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1207: Ribonucleotide reduction protein NrdI
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2112: Ribonucleotide reduction protein NrdI
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1868: Ribonucleotide reduction protein NrdI
 
Corynebacterium efficiens YS-314

Gene: CE2424: Ribonucleotide reduction protein NrdI
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2787: Ribonucleotide reduction protein NrdI
 
Corynebacterium jeikeium K411

Gene: jk0477: Ribonucleotide reduction protein NrdI
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1412: Ribonucleotide reduction protein NrdI
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1482: Ribonucleotide reduction protein NrdI
Ribonucleotide reduction protein NrdI
nrdE
 
Corynebacterium amycolatum SK46

Gene: CORAM0001_1206: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium aurimucosum ATCC 700975

Gene: cauri_2111: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP1867: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium efficiens YS-314

Gene: CE2423: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium glutamicum ATCC 13032

Gene: cg2786: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium jeikeium K411

Gene: jk0478: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium kroppenstedtii DSM 44385

Gene: ckrop_1411: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
Corynebacterium urealyticum DSM 7109

Gene: cur_1481: Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1)
 
CRON 2.
nrdD
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -80
score = 4.04
sequence = CCACTACATATTGATT

Site:
position = -49
score = 4.31
sequence = CAACTATATCTTGTAG

Gene: DIP0465: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
*
Corynebacterium efficiens YS-314

Site:
position = -126
score = 5.08
sequence = TCACTAGATGTAGTGG

Gene: CE2363: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
*
Corynebacterium urealyticum DSM 7109

Site:
position = -156
score = 3.62
sequence = CCACAATATGTAGACA

Site:
position = -125
score = 3.45
sequence = CTTCCATATCTAGCGC

Gene: cur_0305: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
 
Corynebacterium amycolatum SK46
 
Corynebacterium aurimucosum ATCC 700975
 
Corynebacterium diphtheriae NCTC 13129

Gene: DIP0464: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Corynebacterium efficiens YS-314

Gene: CE2362: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
 
Corynebacterium glutamicum ATCC 13032
 
Corynebacterium jeikeium K411
 
Corynebacterium kroppenstedtii DSM 44385
 
Corynebacterium urealyticum DSM 7109

Gene: cur_0304: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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