Regulog ArgR - Corynebacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor |
| Biological process: | Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ArgR
- By taxonomy - Corynebacteriaceae
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Corynebacterium urealyticum DSM 7109 | 8 | 1 |
| Corynebacterium kroppenstedtii DSM 44385 | 8 | 1 |
| Corynebacterium jeikeium K411 | 8 | 1 |
| Corynebacterium glutamicum ATCC 13032 | 11 | 2 |
| Corynebacterium efficiens YS-314 | 11 | 2 |
| Corynebacterium diphtheriae NCTC 13129 | 8 | 1 |
| Corynebacterium aurimucosum ATCC 700975 | 8 | 1 |
| Corynebacterium amycolatum SK46 | 8 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| argC |
*
Corynebacterium urealyticum DSM 7109 Site: position = -62 score = 5.04234 sequence = TGTATATTTTGCA Site: position = -43 score = 4.89674 sequence = TGTATATATTGCA Gene: cur_1117: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium kroppenstedtii DSM 44385 Site: position = -44 score = 5.36256 sequence = TGAATAATTTGCA Gene: ckrop_0836: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium jeikeium K411 Site: position = -62 score = 4.2287 sequence = TGCATAATTCCCA Site: position = -43 score = 5.36256 sequence = TGAATAATTTGCA Gene: jk0841: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium glutamicum ATCC 13032 Site: position = 7 score = 3.49368 sequence = TGCATAACGTGTA Site: position = -12 score = 5.36256 sequence = TGAATAATTTGCA Gene: cg1580: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium efficiens YS-314 Site: position = -58 score = 3.61683 sequence = TGCATAAACCTCA Site: position = -35 score = 5.11828 sequence = TGAATAGTTTGCA Gene: CE1526: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium diphtheriae NCTC 13129 Site: position = -199 score = 4.19025 sequence = TGAATGTTCTGAA Site: position = -45 score = 4.24562 sequence = CGAATACTTTACA Gene: DIP1167: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium aurimucosum ATCC 700975 Site: position = -43 score = 4.10349 sequence = TGAATAACATACG Site: position = -24 score = 4.19505 sequence = TGCATTATTTGCT Gene: cauri_1352: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Corynebacterium amycolatum SK46 Site: position = -35 score = 5.04234 sequence = TGAATATCTTGCA Site: position = -3 score = 4.45069 sequence = TGAATGTTTGGCA Gene: CORAM0001_1681: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| argJ |
Gene: cur_1116: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: ckrop_0837: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: jk0842: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: cg1581: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: CE1527: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: DIP1168: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: cauri_1351: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: CORAM0001_1680: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
| argB |
Gene: cur_1115: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: ckrop_0838: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: jk0843: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: cg1582: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: CE1528: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: DIP1169: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: cauri_1350: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: CORAM0001_1679: Acetylglutamate kinase (EC 2.7.2.8) |
Acetylglutamate kinase (EC 2.7.2.8) |
| argD |
Gene: cur_1114: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: ckrop_0839: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: jk0844: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: cg1583: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: CE1529: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: DIP1170: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: cauri_1349: Acetylornithine aminotransferase (EC 2.6.1.11) |
Gene: CORAM0001_1678: Acetylornithine aminotransferase (EC 2.6.1.11) |
Acetylornithine aminotransferase (EC 2.6.1.11) |
| argF |
Gene: cur_1113: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: ckrop_0840: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: jk0845: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: cg1584: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: CE1530: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: DIP1171: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: cauri_1348: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: CORAM0001_1677: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| argR |
Gene: cur_1112: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: ckrop_0841: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: jk0846: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: cg1585: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: CE1531: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: DIP1172: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: cauri_1347: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Gene: CORAM0001_1676: Arginine pathway regulatory protein ArgR, repressor of arg regulon |
Arginine pathway regulatory protein ArgR, repressor of arg regulon |
| argG |
Gene: cur_1111: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: ckrop_0842: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: jk0847: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: cg1586: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: CE1532: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: DIP1173: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: cauri_1346: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: CORAM0001_1675: Argininosuccinate synthase (EC 6.3.4.5) |
Argininosuccinate synthase (EC 6.3.4.5) |
| argH |
Gene: cur_1110: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: ckrop_0843: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: jk0848: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: cg1588: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: CE1533: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: DIP1174: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: cauri_1345: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: CORAM0001_1674: Argininosuccinate lyase (EC 4.3.2.1) |
Argininosuccinate lyase (EC 4.3.2.1) |
| CRON 2. | |||||||||
| carA |
Gene: cur_0968: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: ckrop_0991: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: jk1023: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Corynebacterium glutamicum ATCC 13032 Site: position = -121 score = 4.78226 sequence = TGCATAGTATGCA Site: position = -98 score = 4.88094 sequence = TGCATATAATGCA Site: position = -79 score = 4.74083 sequence = TGAATAAACTACA Gene: cg1814: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
*
Corynebacterium efficiens YS-314 Site: position = -93 score = 4.88094 sequence = TGCATATAATGCA Site: position = -74 score = 4.74083 sequence = TGAATAAACTACA Gene: CE1730: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: DIP1332: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: cauri_1178: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Gene: CORAM0001_2153: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) |
| carB |
Gene: cur_0969: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: ckrop_0990: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: jk1022: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: cg1813: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: CE1729: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: DIP1331: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: cauri_1179: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Gene: CORAM0001_2154: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
| pyrF |
Gene: cur_0970: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: ckrop_0989: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: jk1021: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: cg1812: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: CE1728: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: DIP1330: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: cauri_1180: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Gene: CORAM0001_2155: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |