Regulog ArgR - Corynebacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	ArgR
Regulation mode:	repressor
Biological process:	Arginine biosynthesis
Effector:	Arginine
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 20 sites [see more]

Member of regulog collections

By trascription factor - ArgR
By taxonomy - Corynebacteriaceae
By TF family - ArgR
By effector - Arginine
By pathway - Arginine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Corynebacterium urealyticum DSM 7109	8	1
Corynebacterium kroppenstedtii DSM 44385	8	1
Corynebacterium jeikeium K411	8	1
Corynebacterium glutamicum ATCC 13032	11	2
Corynebacterium efficiens YS-314	11	2
Corynebacterium diphtheriae NCTC 13129	8	1
Corynebacterium aurimucosum ATCC 700975	8	1
Corynebacterium amycolatum SK46	8	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
argC	* Corynebacterium urealyticum DSM 7109 Site: position = -62 score = 5.04234 sequence = TGTATATTTTGCA Site: position = -43 score = 4.89674 sequence = TGTATATATTGCA Gene: cur_1117: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium kroppenstedtii DSM 44385 Site: position = -44 score = 5.36256 sequence = TGAATAATTTGCA Gene: ckrop_0836: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium jeikeium K411 Site: position = -62 score = 4.2287 sequence = TGCATAATTCCCA Site: position = -43 score = 5.36256 sequence = TGAATAATTTGCA Gene: jk0841: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium glutamicum ATCC 13032 Site: position = 7 score = 3.49368 sequence = TGCATAACGTGTA Site: position = -12 score = 5.36256 sequence = TGAATAATTTGCA Gene: cg1580: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium efficiens YS-314 Site: position = -58 score = 3.61683 sequence = TGCATAAACCTCA Site: position = -35 score = 5.11828 sequence = TGAATAGTTTGCA Gene: CE1526: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium diphtheriae NCTC 13129 Site: position = -199 score = 4.19025 sequence = TGAATGTTCTGAA Site: position = -45 score = 4.24562 sequence = CGAATACTTTACA Gene: DIP1167: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium aurimucosum ATCC 700975 Site: position = -43 score = 4.10349 sequence = TGAATAACATACG Site: position = -24 score = 4.19505 sequence = TGCATTATTTGCT Gene: cauri_1352: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Corynebacterium amycolatum SK46 Site: position = -35 score = 5.04234 sequence = TGAATATCTTGCA Site: position = -3 score = 4.45069 sequence = TGAATGTTTGGCA Gene: CORAM0001_1681: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
argJ	Corynebacterium urealyticum DSM 7109 Gene: cur_1116: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0837: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium jeikeium K411 Gene: jk0842: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium glutamicum ATCC 13032 Gene: cg1581: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium efficiens YS-314 Gene: CE1527: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1168: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1351: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Corynebacterium amycolatum SK46 Gene: CORAM0001_1680: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)	Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1)
argB	Corynebacterium urealyticum DSM 7109 Gene: cur_1115: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0838: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium jeikeium K411 Gene: jk0843: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium glutamicum ATCC 13032 Gene: cg1582: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium efficiens YS-314 Gene: CE1528: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1169: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1350: Acetylglutamate kinase (EC 2.7.2.8)	Corynebacterium amycolatum SK46 Gene: CORAM0001_1679: Acetylglutamate kinase (EC 2.7.2.8)	Acetylglutamate kinase (EC 2.7.2.8)
argD	Corynebacterium urealyticum DSM 7109 Gene: cur_1114: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0839: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium jeikeium K411 Gene: jk0844: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium glutamicum ATCC 13032 Gene: cg1583: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium efficiens YS-314 Gene: CE1529: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1170: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1349: Acetylornithine aminotransferase (EC 2.6.1.11)	Corynebacterium amycolatum SK46 Gene: CORAM0001_1678: Acetylornithine aminotransferase (EC 2.6.1.11)	Acetylornithine aminotransferase (EC 2.6.1.11)
argF	Corynebacterium urealyticum DSM 7109 Gene: cur_1113: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0840: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium jeikeium K411 Gene: jk0845: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium glutamicum ATCC 13032 Gene: cg1584: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium efficiens YS-314 Gene: CE1530: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1171: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1348: Ornithine carbamoyltransferase (EC 2.1.3.3)	Corynebacterium amycolatum SK46 Gene: CORAM0001_1677: Ornithine carbamoyltransferase (EC 2.1.3.3)	Ornithine carbamoyltransferase (EC 2.1.3.3)
argR	Corynebacterium urealyticum DSM 7109 Gene: cur_1112: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0841: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium jeikeium K411 Gene: jk0846: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium glutamicum ATCC 13032 Gene: cg1585: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium efficiens YS-314 Gene: CE1531: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1172: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1347: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Corynebacterium amycolatum SK46 Gene: CORAM0001_1676: Arginine pathway regulatory protein ArgR, repressor of arg regulon	Arginine pathway regulatory protein ArgR, repressor of arg regulon
argG	Corynebacterium urealyticum DSM 7109 Gene: cur_1111: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0842: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium jeikeium K411 Gene: jk0847: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium glutamicum ATCC 13032 Gene: cg1586: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium efficiens YS-314 Gene: CE1532: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1173: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1346: Argininosuccinate synthase (EC 6.3.4.5)	Corynebacterium amycolatum SK46 Gene: CORAM0001_1675: Argininosuccinate synthase (EC 6.3.4.5)	Argininosuccinate synthase (EC 6.3.4.5)
argH	Corynebacterium urealyticum DSM 7109 Gene: cur_1110: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0843: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium jeikeium K411 Gene: jk0848: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium glutamicum ATCC 13032 Gene: cg1588: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium efficiens YS-314 Gene: CE1533: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1174: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1345: Argininosuccinate lyase (EC 4.3.2.1)	Corynebacterium amycolatum SK46 Gene: CORAM0001_1674: Argininosuccinate lyase (EC 4.3.2.1)	Argininosuccinate lyase (EC 4.3.2.1)

CRON 2.
carA	Corynebacterium urealyticum DSM 7109 Gene: cur_0968: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0991: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Corynebacterium jeikeium K411 Gene: jk1023: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	* Corynebacterium glutamicum ATCC 13032 Site: position = -121 score = 4.78226 sequence = TGCATAGTATGCA Site: position = -98 score = 4.88094 sequence = TGCATATAATGCA Site: position = -79 score = 4.74083 sequence = TGAATAAACTACA Gene: cg1814: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	* Corynebacterium efficiens YS-314 Site: position = -93 score = 4.88094 sequence = TGCATATAATGCA Site: position = -74 score = 4.74083 sequence = TGAATAAACTACA Gene: CE1730: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1332: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1178: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Corynebacterium amycolatum SK46 Gene: CORAM0001_2153: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
carB	Corynebacterium urealyticum DSM 7109 Gene: cur_0969: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0990: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium jeikeium K411 Gene: jk1022: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium glutamicum ATCC 13032 Gene: cg1813: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium efficiens YS-314 Gene: CE1729: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1331: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1179: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Corynebacterium amycolatum SK46 Gene: CORAM0001_2154: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
pyrF	Corynebacterium urealyticum DSM 7109 Gene: cur_0970: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium kroppenstedtii DSM 44385 Gene: ckrop_0989: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium jeikeium K411 Gene: jk1021: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium glutamicum ATCC 13032 Gene: cg1812: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium efficiens YS-314 Gene: CE1728: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium diphtheriae NCTC 13129 Gene: DIP1330: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium aurimucosum ATCC 700975 Gene: cauri_1180: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Corynebacterium amycolatum SK46 Gene: CORAM0001_2155: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ArgR - Corynebacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --