Collection of regulogs involved in Riboflavin biosynthesis
Type | Phylum | Regulog | Regulons (studied genomes) | Regulatory sites |
---|---|---|---|---|
TF | Crenarchaeota | RbkR - Sulfolobales | 5 (5) | 12 |
TF | Crenarchaeota | RbkR - Thermoproteales | 5 (5) | 23 |
TF | Euryarchaeota | RbkR - Archaeoglobales | 3 (3) | 5 |
TF | Euryarchaeota | RbkR - Halobacteriales | 10 (11) | 14 |
TF | Euryarchaeota | RbkR - Methanomicrobiales | 5 (5) | 6 |
TF | Euryarchaeota | RbkR - Methanosarcinales | 5 (6) | 9 |
TF | Euryarchaeota | RbkR - Thermococcales | 7 (7) | 13 |
TF | Euryarchaeota | RbkR - Thermoplasmatales | 4 (4) | 13 |
RNA | Actinobacteria | FMN - Bifidobacteriaceae | 9 (9) | 9 |
RNA | Actinobacteria | FMN - Corynebacteriaceae | 3 (8) | 3 |
RNA | Actinobacteria | FMN - Streptomycetaceae | 4 (4) | 4 |
RNA | Chlorobiales | FMN - Chlorobiales | 2 (11) | 2 |
RNA | Chloroflexi | FMN - Chloroflexia | 5 (5) | 8 |
RNA | Deinococcus-Thermus | FMN - Deinococcus-Thermus | 5 (5) | 5 |
RNA | Firmicutes | FMN - Bacillales | 11 (11) | 20 |
RNA | Firmicutes | FMN - Clostridia-2 | 3 (3) | 8 |
RNA | Firmicutes | FMN - Clostridia-3 | 14 (14) | 22 |
RNA | Firmicutes | FMN - Clostridiaceae | 20 (20) | 38 |
RNA | Firmicutes | FMN - Lactobacillaceae | 15 (15) | 19 |
RNA | Firmicutes | FMN - Staphylococcaceae | 7 (7) | 14 |
RNA | Firmicutes | FMN - Streptococcaceae | 15 (15) | 19 |
RNA | Firmicutes | FMN - Thermoanaerobacterales | 7 (7) | 9 |
RNA | Proteobacteria | FMN - Burkholderia | 8 (8) | 9 |
RNA | Proteobacteria | FMN - Caulobacterales | 1 (4) | 1 |
RNA | Proteobacteria | FMN - Enterobacteriales | 12 (12) | 12 |
RNA | Proteobacteria | FMN - Pasteurellales | 9 (9) | 9 |
RNA | Proteobacteria | FMN - Pseudomonadaceae | 8 (8) | 8 |
RNA | Proteobacteria | FMN - Ralstonia | 6 (6) | 6 |
RNA | Proteobacteria | FMN - Rhizobiales | 9 (15) | 12 |
RNA | Proteobacteria | FMN - Rhodobacterales | 6 (15) | 7 |
RNA | Proteobacteria | FMN - Shewanellaceae | 15 (16) | 15 |
RNA | Proteobacteria | FMN - Vibrionales | 8 (10) | 8 |
RNA | Proteobacteria/Alpha | FMN - Rhodospirillales | 4 (9) | 4 |
RNA | Proteobacteria/Beta | FMN - Comamonadaceae | 4 (11) | 4 |
RNA | Proteobacteria/Beta | FMN - Various betaproteobacteria | 1 (12) | 1 |
RNA | Proteobacteria/Delta | FMN - Desulfovibrionales | 8 (10) | 8 |
RNA | Proteobacteria/Delta | FMN - Desulfuromonadales | 3 (9) | 3 |
RNA | Proteobacteria/Epsilon | TPP - Campylobacteraceae | 4 (9) | 5 |
RNA | Proteobacteria/Gamma | FMN - Alteromonadales | 1 (9) | 1 |
RNA | Proteobacteria/Gamma | FMN - Francisellaceae | 3 (3) | 3 |
RNA | Proteobacteria/Gamma | FMN - Moraxellaceae | 2 (4) | 2 |
RNA | Proteobacteria/Gamma | FMN - Oceanospirillales/Alteromonadales | 3 (12) | 4 |
RNA | Proteobacteria/Gamma | FMN - Psychromonadaceae/Aeromonadales | 5 (6) | 5 |
RNA | Proteobacteria/Gamma | FMN - Xanthomonadales | 3 (4) | 3 |
RNA | Thermotogae | FMN - Thermotogales | 8 (11) | 8 |