Regulog FMN - Pasteurellales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Pasteurellales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | 1 | 1 |
| Aggregatibacter aphrophilus NJ8700 | 1 | 1 |
| Pasteurella multocida subsp. multocida str. Pm70 | 1 | 1 |
| Mannheimia succiniciproducens MBEL55E | 1 | 1 |
| Actinobacillus succinogenes 130Z | 1 | 1 |
| Haemophilus somnus 2336 | 1 | 1 |
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 4 | 1 |
| Haemophilus ducreyi 35000HP | 4 | 1 |
| Haemophilus parasuis SH0165 | 4 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| ribB |
*
Haemophilus influenzae Rd KW20 Site: position = -265 score = 114.1 sequence = CGCATTCTCAGGGCA... Gene: HI0764: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -266 score = 112.05 sequence = CGCGCATTCTCAGGG... Gene: NT05HA_1865: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -273 score = 124.01 sequence = TGCGCATTCTCAGGG... Gene: PM1385: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Mannheimia succiniciproducens MBEL55E Site: position = -248 score = 117.28 sequence = GGCATTCTCAGGGCA... Gene: MS0172: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*2
Actinobacillus succinogenes 130Z Site: position = -203 score = 115.71 sequence = CGCATTCTCAGGGCA... Gene: Asuc_0488: 3,4-dihydroxy-2-butanone 4-phosphate synthase Gene: Asuc_0177: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Haemophilus somnus 2336 Site: position = -252 score = 129.92 sequence = TGCATTCTCAGGGCA... Gene: HSM_1983: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|
|
|
3,4-dihydroxy-2-butanone 4-phosphate synthase |
| CRON 2. | ||||||||||
| ribD |
Gene: HI0944: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
Gene: NT05HA_1102: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
Gene: PM0749: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
Gene: MS1374: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
Gene: Asuc_1368: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
Gene: HSM_1534: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -212 score = 125.36 sequence = ATAATCTTCAGGGCA... Gene: APP7_0406: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
*
Haemophilus ducreyi 35000HP Site: position = -295 score = 108.9 sequence = TTAATCTTCAGGGCA... Gene: HD1161: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
*
Haemophilus parasuis SH0165 Site: position = -377 score = 106.06 sequence = TTAATCTTCAGGGCA... Gene: HAPS_1134: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
| ribE |
Gene: HI1613: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: NT05HA_0907: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: PM0650: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: MS1313: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: Asuc_1175: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: HSM_1281: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: APP7_0407: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: HD1162: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Gene: HAPS_1135: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Riboflavin synthase alpha chain (EC 2.5.1.9) |
| ribBA |
|
|
|
|
|
|
Gene: APP7_0408: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: HD1163: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: HAPS_1136: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
| ribH |
Gene: HI1303: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: NT05HA_0683: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: PM0731: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: MS0976: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: Asuc_1488: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: HSM_1299: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: APP7_0409: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: HD1165: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: HAPS_1137: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |