Regulog FMN - Desulfovibrionales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Delta |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Desulfohalobium retbaense DSM 5692 | ||
| Desulfomicrobium baculatum DSM 4028 | 1 | 1 |
| Desulfovibrio desulfuricans G20 | 1 | 1 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 1 | 1 |
| Desulfovibrio magneticus RS-1 | 1 | 1 |
| Desulfovibrio piger ATCC 29098 | 1 | 1 |
| Desulfovibrio salexigens DSM 2638 | 1 | 1 |
| Desulfovibrio vulgaris Hildenborough | 1 | 1 |
| Desulfovibrio vulgaris str. Miyazaki F | 1 | 1 |
| Lawsonia intracellularis PHE/MN1-00 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| ribB |
|
*
Desulfomicrobium baculatum DSM 4028 Site: position = -71 score = 98.6 sequence = GGCCGCCGTTCACGG... Gene: Dbac_0862: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio desulfuricans G20 Site: position = -293 score = 100.11 sequence = CTTATTCTCAGGGCG... Gene: Dde_1050: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -156 score = 102.08 sequence = TTGCAGCCGCCAATG... Gene: Ddes_2290: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio magneticus RS-1 Site: position = -267 score = 83.54 sequence = GTTGTCCTCAGGGCG... Gene: DMR_35270: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio piger ATCC 29098 Site: position = -271 score = 94.99 sequence = TCCATTCTCAGGGCG... Gene: DESPIG_01856: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio salexigens DSM 2638 Site: position = -107 score = 124.77 sequence = GACAGTCTTACCGCA... Gene: Desal_2097: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio vulgaris Hildenborough Site: position = -96 score = 105.13 sequence = GGCGGTGGCATCCGT... Gene: DVU1775: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -450 score = 87.96 sequence = CGAATCCTCAGGGCG... Gene: DvMF_2680: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|
3,4-dihydroxy-2-butanone 4-phosphate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |