Regulog FMN - Alteromonadales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Gamma |
Member of regulog collections
- By taxonomy - Alteromonadales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Pseudoalteromonas atlantica T6c | ||
| Alteromonas macleodii 'Deep ecotype' | ||
| Glaciecola sp. HTCC2999 | ||
| Colwellia psychrerythraea 34H | ||
| Alteromonadales bacterium TW-7 | ||
| Pseudoalteromonas haloplanktis TAC125 | 1 | 1 |
| Pseudoalteromonas tunicata D2 | ||
| Idiomarina baltica OS145 | ||
| Idiomarina loihiensis L2TR |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| ribB |
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Pseudoalteromonas haloplanktis TAC125 Site: position = -338 score = 110.65 sequence = TACATTCTCAGGGCG... Gene: PSHAa1233: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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3,4-dihydroxy-2-butanone 4-phosphate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |