Regulog FMN - Desulfuromonadales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Delta |
Member of regulog collections
- By taxonomy - Desulfuromonadales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Geobacter metallireducens GS-15 | ||
| Geobacter sulfurreducens PCA | ||
| Geobacter uraniumreducens Rf4 | ||
| Geobacter sp. FRC-32 | ||
| Geobacter sp. M21 | ||
| Geobacter lovleyi SZ | ||
| Pelobacter propionicus DSM 2379 | 1 | 1 |
| Pelobacter carbinolicus str. DSM 2380 | 1 | 1 |
| Desulfuromonas acetoxidans DSM 684 | 1 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| ribB |
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Pelobacter propionicus DSM 2379 Site: position = -265 score = 112.28 sequence = CTTATTCTCAGGGCG... Gene: Ppro_0312: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Pelobacter carbinolicus str. DSM 2380 Site: position = -244 score = 105.71 sequence = GTAAAGTTCTCAGGG... Gene: Pcar_0884: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Desulfuromonas acetoxidans DSM 684 Site: position = -228 score = 124.56 sequence = CCTATTCTCAGGGCG... Gene: Dace_1777: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
3,4-dihydroxy-2-butanone 4-phosphate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |