Regulog FMN - Chlorobiales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Chlorobiales |
Member of regulog collections
- By taxonomy - Chlorobiales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Chlorobium chlorochromatii CaD3 | ||
| Chlorobaculum parvum NCIB 8327 | ||
| Pelodictyon luteolum DSM 273 | ||
| Chlorobium ferrooxidans DSM 13031 | ||
| Prosthecochloris aestuarii DSM 271 | ||
| Chlorobium phaeobacteroides BS1 | ||
| Chlorobium phaeobacteroides DSM 266 | ||
| Prosthecochloris vibrioformis DSM 265 | ||
| Chlorobium limicola DSM 245 | 1 | 1 |
| Chloroherpeton thalassium ATCC 35110 | 1 | 1 |
| Pelodictyon phaeoclathratiforme BU-1 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| ribB |
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Chlorobium limicola DSM 245 Site: position = -206 score = 101.78 sequence = TTGTTTCTCAGGGCG... Gene: Clim_0178: 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) |
*
Chloroherpeton thalassium ATCC 35110 Site: position = -249 score = 109.97 sequence = AACTTGTTCTCAGGG... Gene: Ctha_0748: 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) |
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3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |