Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog FMN - Burkholderia

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia pseudomallei K96243 1 1
Burkholderia mallei ATCC 23344 1 1
Burkholderia sp. 383 2 2
Burkholderia cepacia AMMD 1 1
Burkholderia vietnamiensis G4 1 1
Burkholderia glumae BGR1 1 1
Burkholderia xenovorans LB400 1 1
Burkholderia phymatum STM815 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribB
*
Burkholderia pseudomallei K96243

Site:
position = -290
score = 95.55
sequence = TGCGTCTTCAGGGCG...

Gene: BPSL0678: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Burkholderia mallei ATCC 23344

Site:
position = -290
score = 93.98
sequence = TGCGTCTTCAGGGCG...

Gene: BMA0230: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Burkholderia sp. 383

Site:
position = -268
score = 97.44
sequence = AGTGCGTCTTCAGGG...

Gene: Bcep18194_A6016: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Burkholderia cepacia AMMD

Site:
position = -268
score = 97.02
sequence = AGTGCGTCTTCAGGG...

Gene: Bamb_2742: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Burkholderia vietnamiensis G4

Site:
position = -268
score = 97.17
sequence = AGTGCGTCTTCAGGG...

Gene: Bcep1808_2793: 3,4-dihydroxy-2-butanone 4-phosphate synthase
 
Burkholderia glumae BGR1
*2
Burkholderia xenovorans LB400

Site:
position = -270
score = 46.84
sequence = TTTGCATGGGACCGG...

Gene: Bxe_A0635: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene: Bxe_C0952: 3,4-dihydroxy-2-butanone 4-phosphate synthase
*
Burkholderia phymatum STM815

Site:
position = -390
score = 99.56
sequence = TACGTCTTCAGGGCG...

Gene: Bphy_0417: 3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase
 
CRON 2.
ribH
 
Burkholderia pseudomallei K96243
 
Burkholderia mallei ATCC 23344
*
Burkholderia sp. 383

Site:
position = -222
score = 103.93
sequence = AACGTTCTCGGGGCG...

Gene: Bcep18194_B1525: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Burkholderia cepacia AMMD
 
Burkholderia vietnamiensis G4
*
Burkholderia glumae BGR1

Site:
position = -229
score = 97.75
sequence = CGAACGTTCTCAGGG...

Gene: bglu_2g11360: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Burkholderia xenovorans LB400
 
Burkholderia phymatum STM815
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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