Regulog FMN - Enterobacteriales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 1 | 1 |
| Edwardsiella tarda EIB202 | 1 | 1 |
| Enterobacter sp. 638 | 1 | 1 |
| Erwinia amylovora ATCC 49946 | 1 | 1 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 1 | 1 |
| Escherichia coli str. K-12 substr. MG1655 | 1 | 1 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 1 | 1 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 1 | 1 |
| Proteus mirabilis HI4320 | 1 | 1 |
| Salmonella typhimurium LT2 | 1 | 1 |
| Serratia proteamaculans 568 | 1 | 1 |
| Yersinia pestis KIM | 1 | 1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| ribB |
*
Citrobacter koseri ATCC BAA-895 Site: position = -107 score = 108.08 sequence = CGATCCAGTCGGGCA... Gene: CKO_04434: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Edwardsiella tarda EIB202 Site: position = -140 score = 115.89 sequence = CTTATTCTCAGGGCG... Gene: ETAE_0472: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Enterobacter sp. 638 Site: position = -107 score = 123.67 sequence = CGATCAAGTCGGGCA... Gene: Ent638_3453: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Erwinia amylovora ATCC 49946 Site: position = -109 score = 123.64 sequence = CGATTCTTGACGGGC... Gene: EAM_2992: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -327 score = 108.59 sequence = CTTATTCTCAGGGCG... Gene: ECA0899: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -105 score = 123.48 sequence = CGATTCTGTCGGGCA... Gene: b3041: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -107 score = 121.32 sequence = CGGCACAGTCGGGCC... Gene: KPN_03454: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -147 score = 101.81 sequence = CGGCATCTGTCGGGC... Gene: plu3963: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Proteus mirabilis HI4320 Site: position = -126 score = 116.26 sequence = AATAGCATCAGTGGG... Gene: PMI2353: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Salmonella typhimurium LT2 Site: position = -107 score = 109.59 sequence = CGATCCAGTCGGGCA... Gene: STM3195: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Serratia proteamaculans 568 Site: position = -112 score = 118.15 sequence = CGGTATCTGCCGGGT... Gene: Spro_4286: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Yersinia pestis KIM Site: position = -243 score = 111.81 sequence = CGGTATCTGCCGGGC... Gene: y3520: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
3,4-dihydroxy-2-butanone 4-phosphate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |