Regulog FMN - Various betaproteobacteria
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Beta |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Azoarcus sp. EbN1 | ||
| Thauera sp. MZ1T | ||
| Dechloromonas aromatica RCB | ||
| Nitrosomonas europaea ATCC 19718 | ||
| Nitrosospira multiformis ATCC 25196 | ||
| Thiobacillus denitrificans | ||
| Chromobacterium violaceum ATCC 12472 | 2 | 1 |
| Neisseria meningitidis MC58 | ||
| Laribacter hongkongensis HLHK9 | ||
| Methylobacillus flagellatus KT | ||
| Methylotenera mobilis JLW8 | ||
| Methylophilales bacterium HTCC2181 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| ribB |
|
|
|
|
|
|
*
Chromobacterium violaceum ATCC 12472 Site: position = -279 score = 110.41 sequence = TACGTCTTCGGGGCG... Gene: CV4216: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|
|
|
|
|
3,4-dihydroxy-2-butanone 4-phosphate synthase |
| ribE |
|
|
|
|
|
|
Gene: CV4217: Riboflavin synthase alpha chain (EC 2.5.1.9) |
|
|
|
|
|
Riboflavin synthase alpha chain (EC 2.5.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |