Regulog FMN - Streptomycetaceae
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Streptomyces griseus subsp. griseus NBRC 13350 | 5 | 1 |
| Streptomyces scabiei 87.22 | 4 | 1 |
| Streptomyces avermitilis MA-4680 | 4 | 1 |
| Streptomyces coelicolor A3(2) | 4 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| ribD |
*
Streptomyces griseus subsp. griseus NBRC 13350 Site: position = -303 score = 85.75 sequence = AGCGCACTCCGGGGT... Gene: SGR_6089: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
|
|
|
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) |
| ribE |
Gene: SGR_6090: Riboflavin synthase alpha chain (EC 2.5.1.9) |
*
Streptomyces scabiei 87.22 Site: position = -285 score = 90.02 sequence = AGCGCACTCCGGGGT... Gene: SCAB_75601: Riboflavin synthase alpha chain (EC 2.5.1.9) |
*
Streptomyces avermitilis MA-4680 Site: position = -279 score = 92.04 sequence = AGCGCACTCCGGGGT... Gene: SAV_6902: Riboflavin synthase alpha chain (EC 2.5.1.9) |
*
Streptomyces coelicolor A3(2) Site: position = -280 score = 89.85 sequence = GCAGCGCACTCCGGG... Gene: SCO1443: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Riboflavin synthase alpha chain (EC 2.5.1.9) |
| pnuX |
Gene: SGR_6091: Riboflavin transporter PnuX |
Gene: SCAB_75611: Riboflavin transporter PnuX |
Gene: SAV_6903: Riboflavin transporter PnuX |
Gene: SCO1442: Riboflavin transporter PnuX |
Riboflavin transporter PnuX |
| ribAB |
Gene: SGR_6092: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: SCAB_75621: riboflavin biosynthesis protein RibA/GTP cyclohydrolase II |
Gene: SAV_6904: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: SCO1441: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
| ribH |
Gene: SGR_6093: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: SCAB_75631: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: SAV_6905: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: SCO1440: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |