Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog FMN - Francisellaceae

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria/Gamma
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Francisella philomiragia subsp. philomiragia ATCC 25017 4 1
Francisella tularensis subsp. tularensis SCHU S4 4 1
Francisella novicida FTE 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ribD
*
Francisella philomiragia subsp. philomiragia ATCC 25017

Site:
position = -256
score = 128.01
sequence = ATAATCTTCAGGGCA...

Gene: Fphi_0713: 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) / Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
*
Francisella tularensis subsp. tularensis SCHU S4

Site:
position = -269
score = 128.4
sequence = ATAATCTTCAGGGCA...

Gene: FTT_1671: 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) / Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
*
Francisella novicida FTE

Site:
position = -271
score = 128.28
sequence = AAATAATCTTCAGGG...

Gene: FTE_0404: 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) / Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) / Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
ribE
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0714: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Francisella tularensis subsp. tularensis SCHU S4

Gene: FTT_1672: Riboflavin synthase alpha chain (EC 2.5.1.9)
 
Francisella novicida FTE

Gene: FTE_0403: Riboflavin synthase alpha chain (EC 2.5.1.9)
Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0715: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Francisella tularensis subsp. tularensis SCHU S4

Gene: FTT_1673: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
 
Francisella novicida FTE

Gene: FTE_0402: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
ribH
 
Francisella philomiragia subsp. philomiragia ATCC 25017

Gene: Fphi_0716: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Francisella tularensis subsp. tularensis SCHU S4

Gene: FTT_1674: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
 
Francisella novicida FTE

Gene: FTE_0401: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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