Regulog FMN - Ralstonia
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Ralstonia
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | 1 | 1 |
| Ralstonia eutropha H16 | 1 | 1 |
| Ralstonia eutropha JMP134 | 1 | 1 |
| Ralstonia metallidurans CH34 | 1 | 1 |
| Ralstonia pickettii 12J | 1 | 1 |
| Ralstonia solanacearum GMI1000 | 1 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| ribB |
*
Cupriavidus taiwanensis Site: position = -326 score = 98.71 sequence = TACGTCTTCAGGGCG... Gene: RALTA_B1130: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Ralstonia eutropha H16 Site: position = -309 score = 96.03 sequence = TACGTCTTCAGGGCG... Gene: H16_B1223: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Ralstonia eutropha JMP134 Site: position = -336 score = 100.11 sequence = TACGTCTTCAGGGCG... Gene: Reut_B4029: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Ralstonia metallidurans CH34 Site: position = -126 score = 98.93 sequence = GCGGAATTCGCATGA... Gene: Rmet_4758: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Ralstonia pickettii 12J Site: position = -281 score = 108.32 sequence = TACGTCTTCAGGGCG... Gene: Rpic_4191: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Ralstonia solanacearum GMI1000 Site: position = -170 score = 96.08 sequence = GCGGAACGATGCGCG... Gene: RSp1191: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
3,4-dihydroxy-2-butanone 4-phosphate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |