Statistics of regulated genes

Genome	Genes	Operons
Clostridiales bacterium 1_7_47_FAA	5	2
Clostridium bolteae ATCC BAA-613	5	2
Eubacterium eligens ATCC 27750	4	1
Roseburia intestinalis L1-82	2	2
Ruminococcus gnavus ATCC 29149	1	1
Dorea longicatena DSM 13814	5	2
Blautia hansenii DSM 20583	5	2
Clostridium nexile DSM 1787	1	1
Clostridium scindens ATCC 35704	2	2
Eubacterium rectale ATCC 33656	5	2
Ruminococcus lactaris ATCC 29176	1	1
Dorea formicigenerans ATCC 27755	5	2
Bryantella formatexigens DSM 14469	1	1
Bacteroides pectinophilus ATCC 43243	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes															Function
CRON 1.
ribD	* Clostridiales bacterium 1_7_47_FAA Site: position = -499 score = 113.67 sequence = AATATCTTCAGGGCA... Gene: Cbac1_010100006733: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	* Clostridium bolteae ATCC BAA-613 Site: position = -688 score = 117.1 sequence = AATATCTTCAGGGCA... Gene: CLOBOL_02805: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	* Eubacterium eligens ATCC 27750 Site: position = -847 score = 109.32 sequence = TATGGAACTTCAGGG... Gene: EUBELI_20114: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	* Roseburia intestinalis L1-82 Site: position = -384 score = 114.49 sequence = ATGATCTTCAGGGCA... Gene: ROSINTL182_02839: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	Ruminococcus gnavus ATCC 29149	* Dorea longicatena DSM 13814 Site: position = -280 score = 111.5 sequence = ACGAAATCTTCAGGG... Gene: DORLON_02764: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	* Blautia hansenii DSM 20583 Site: position = -289 score = 119.85 sequence = ATAAAATCTTCAGGG... Gene: BLAHAN_02906: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	* Eubacterium rectale ATCC 33656 Site: position = -345 score = 107.53 sequence = AATTATTCTTCAGGG... Gene: EUBREC_3132: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	Ruminococcus lactaris ATCC 29176	* Dorea formicigenerans ATCC 27755 Site: position = -288 score = 113.03 sequence = GAAATCTTCAGGGCA... Gene: DORFOR_00288: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	Bryantella formatexigens DSM 14469	Bacteroides pectinophilus ATCC 43243	Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
ribE	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100006738: Riboflavin synthase alpha chain (EC 2.5.1.9)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_02806: Riboflavin synthase alpha chain (EC 2.5.1.9)	Eubacterium eligens ATCC 27750 Gene: EUBELI_20113: Riboflavin synthase alpha chain (EC 2.5.1.9)	Roseburia intestinalis L1-82 Gene: ROSINTL182_02841: Riboflavin synthase alpha chain (EC 2.5.1.9)	Ruminococcus gnavus ATCC 29149	Dorea longicatena DSM 13814 Gene: DORLON_02763: Riboflavin synthase alpha chain (EC 2.5.1.9)	Blautia hansenii DSM 20583 Gene: BLAHAN_02905: Riboflavin synthase alpha chain (EC 2.5.1.9)	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Eubacterium rectale ATCC 33656 Gene: EUBREC_3131: Riboflavin synthase alpha chain (EC 2.5.1.9)	Ruminococcus lactaris ATCC 29176	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00289: Riboflavin synthase alpha chain (EC 2.5.1.9)	Bryantella formatexigens DSM 14469	Bacteroides pectinophilus ATCC 43243	Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100006743: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_02807: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Eubacterium eligens ATCC 27750 Gene: EUBELI_20112: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Roseburia intestinalis L1-82 Gene: ROSINTL182_02842: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Ruminococcus gnavus ATCC 29149	Dorea longicatena DSM 13814 Gene: DORLON_02762: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Blautia hansenii DSM 20583 Gene: BLAHAN_02904: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Eubacterium rectale ATCC 33656 Gene: EUBREC_3130: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Ruminococcus lactaris ATCC 29176	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00290: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)	Bryantella formatexigens DSM 14469	Bacteroides pectinophilus ATCC 43243	3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
ribH	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100006748: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_02808: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Eubacterium eligens ATCC 27750 Gene: EUBELI_20111: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Roseburia intestinalis L1-82 Gene: ROSINTL182_02843: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Ruminococcus gnavus ATCC 29149	Dorea longicatena DSM 13814 Gene: DORLON_02761: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Blautia hansenii DSM 20583 Gene: BLAHAN_02903: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Eubacterium rectale ATCC 33656 Gene: EUBREC_3129: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Ruminococcus lactaris ATCC 29176	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00291: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)	Bryantella formatexigens DSM 14469	Bacteroides pectinophilus ATCC 43243	6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
CRON 2.
ribU	* Clostridiales bacterium 1_7_47_FAA Site: position = -127 score = 108.14 sequence = ATAAGTTCTTCGGGG... Gene: Cbac1_010100023592: Substrate-specific component RibU of riboflavin ECF transporter	* Clostridium bolteae ATCC BAA-613 Site: position = -352 score = 114.43 sequence = TAAAGTTCTTCGGGG... Gene: CLOBOL_02256: Substrate-specific component RibU of riboflavin ECF transporter	Eubacterium eligens ATCC 27750 Gene: EUBELI_20519: Substrate-specific component RibU of riboflavin ECF transporter	* Roseburia intestinalis L1-82 Site: position = -152 score = 88.51 sequence = TAATTCTTCGGGGCA... Gene: ROSINTL182_01713: Substrate-specific component RibU of riboflavin ECF transporter	* Ruminococcus gnavus ATCC 29149 Site: position = -272 score = 97.39 sequence = AATAAATCTTCGGGG... Gene: RUMGNA_02978: Substrate-specific component RibU of riboflavin ECF transporter	* Dorea longicatena DSM 13814 Site: position = -315 score = 101.27 sequence = AGATTCTTCGGGGCA... Gene: DORLON_02252: Substrate-specific component RibU of riboflavin ECF transporter	* Blautia hansenii DSM 20583 Site: position = -211 score = 117.85 sequence = AGAAATTCTTCGGGG... Gene: BLAHAN_01242: Substrate-specific component RibU of riboflavin ECF transporter	* Clostridium nexile DSM 1787 Site: position = -239 score = 113.38 sequence = GGATTCTTCGGGGCA... Gene: CLONEX_02849: Substrate-specific component RibU of riboflavin ECF transporter	*2 Clostridium scindens ATCC 35704 Site: position = -142 score = 109.59 sequence = AGAGATTCTTCGGGG... Gene: CLOSCI_02146: Substrate-specific component RibU of riboflavin ECF transporter Site: position = -192 score = 91.41 sequence = GAAGTCTTTGTGGCA... Gene: CLOSCI_02942: Substrate-specific component RibU of riboflavin ECF transporter	* Eubacterium rectale ATCC 33656 Site: position = -244 score = 110.32 sequence = GAATTCTTCAGGGCA... Gene: EUBREC_0834: Substrate-specific component RibU of riboflavin ECF transporter	* Ruminococcus lactaris ATCC 29176 Site: position = -312 score = 92.51 sequence = GTAATCTTCGGGGTC... Gene: RUMLAC_02357: Substrate-specific component RibU of riboflavin ECF transporter	* Dorea formicigenerans ATCC 27755 Site: position = -348 score = 119.79 sequence = AGAGATTCTTCGGGG... Gene: DORFOR_03135: Substrate-specific component RibU of riboflavin ECF transporter	* Bryantella formatexigens DSM 14469 Site: position = -202 score = 114.9 sequence = GAAATCTTCGGGGCA... Gene: BRYFOR_03730: Substrate-specific component RibU of riboflavin ECF transporter	* Bacteroides pectinophilus ATCC 43243 Site: position = -213 score = 64.11 sequence = GAATGAACGGCAGAT... Gene: BACPEC_00730: Substrate-specific component RibU of riboflavin ECF transporter	Substrate-specific component RibU of riboflavin ECF transporter

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD