Regulog FMN - Psychromonadaceae/Aeromonadales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Gamma |
Member of regulog collections
- By taxonomy - Psychromonadaceae/Aeromonadales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Psychromonas ingrahamii 37 | ||
| Psychromonas sp. CNPT3 | 1 | 1 |
| Moritella sp. PE36 | 1 | 1 |
| Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 1 | 1 |
| Aeromonas salmonicida subsp. salmonicida A449 | 1 | 1 |
| Tolumonas auensis DSM 9187 | 1 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| ribB |
|
*
Psychromonas sp. CNPT3 Site: position = -251 score = 117.43 sequence = ACTATTCTCAGGGCG... Gene: PCNPT3_11584: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Moritella sp. PE36 Site: position = -380 score = 37.81 sequence = ATAATTCTCAGGGCG... Gene: PE36_19425: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -259 score = 110.15 sequence = CTTATTCTCAGGGCG... Gene: AHA_1311: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Aeromonas salmonicida subsp. salmonicida A449 Site: position = -263 score = 111.76 sequence = CTTATTCTCAGGGCG... Gene: ASA_1293: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
*
Tolumonas auensis DSM 9187 Site: position = -242 score = 119.47 sequence = AGCATATTCTCAGGG... Gene: Tola_1102: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
3,4-dihydroxy-2-butanone 4-phosphate synthase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |