Regulog FMN - Xanthomonadales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Gamma |
Member of regulog collections
- By taxonomy - Xanthomonadales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Xylella fastidiosa 9a5c | ||
| Xanthomonas axonopodis pv. citri str. 306 | 2 | 1 |
| Xanthomonas campestris pv. campestris str. ATCC 33913 | 3 | 1 |
| Stenotrophomonas maltophilia K279a | 2 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| ribE |
Gene: XF0952: Riboflavin synthase alpha chain (EC 2.5.1.9) |
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -346 score = 95.96 sequence = AACGTCTTCAGGGCG... Gene: XAC0748: Riboflavin synthase alpha chain (EC 2.5.1.9) |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -336 score = 101.18 sequence = AACGTCTTCAGGGCG... Gene: XCC0695: Riboflavin synthase alpha chain (EC 2.5.1.9) |
*
Stenotrophomonas maltophilia K279a Site: position = -219 score = 104.76 sequence = AACGTCTTCAGGGCG... Gene: Smlt0727: Riboflavin synthase alpha chain (EC 2.5.1.9) |
Riboflavin synthase alpha chain (EC 2.5.1.9) |
| ribBA |
Gene: XF0953: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: XAC0749: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: XCC0696: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
Gene: Smlt0728: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
| ribH |
Gene: XF0954: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: XAC0750: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: XCC0697: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: Smlt0729: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |