Regulog FMN - Oceanospirillales/Alteromonadales
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria/Gamma |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By RNA motif - FMN
- By effector - Flavin mononucleotide
- By pathway - Riboflavin biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Hahella chejuensis KCTC 2396 | 1 | 1 |
| Marinobacter aqueolei | ||
| Marinobacter sp. ELB17 | ||
| Oceanobacter sp. RED65 | ||
| Oceanospirillum sp. MED92 | ||
| Marinomonas sp. MWYL1 | 2 | 2 |
| Saccharophagus degradans 2-40 | ||
| Teredinibacter turnerae T7901 | ||
| Cellvibrio japonicus Ueda107 | ||
| Chromohalobacter salexigens DSM 3043 | ||
| Reinekea sp. MED297 | 1 | 1 |
| Alcanivorax borkumensis SK2 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| emrE |
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Marinomonas sp. MWYL1 Site: position = -295 score = 106.5 sequence = TCGAACTTCGGGGCG... Gene: Mmwyl1_0168: Multidrug resistance efflux transporter EmrE |
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Reinekea sp. MED297 Site: position = -323 score = 25.09 sequence = GTTGTTTTTGTCAGG... Gene: MED297_12482: Multidrug resistance efflux transporter EmrE |
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Multidrug resistance efflux transporter EmrE |
| CRON 2. | |||||||||||||
| ribH |
Gene: HCH_05954: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: Maqu_0845: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: MELB17_19651: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: RED65_16066: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: MED92_17858: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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Marinomonas sp. MWYL1 Site: position = -284 score = 121.09 sequence = ACTTCGTTCTCGGGG... Gene: Mmwyl1_1372: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: Sde_3455: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: TERTU_3701: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: CJA_2694: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: Csal_2583: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: MED297_09511: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
Gene: ABO_2171: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
| CRON 3. | |||||||||||||
| ribB |
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Hahella chejuensis KCTC 2396 Site: position = -132 score = 116.76 sequence = AACTTATTCTCAGGG... Gene: HCH_01388: 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) |
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3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |