Collection of regulogs involved in Methionine biosynthesis
Type | Phylum | Regulog | Regulons (studied genomes) | Regulatory sites |
---|---|---|---|---|
TF | Actinobacteria | McbR - Corynebacteriaceae | 8 (8) | 162 |
TF | Firmicutes | MtaR - Lactobacillaceae | 1 (15) | 2 |
TF | Proteobacteria/Alpha | MetR - Rhodobacterales | 13 (15) | 30 |
TF | Proteobacteria/Beta | MetR - Alcaligenaceae | 3 (3) | 13 |
TF | Proteobacteria/Beta | MetR - Burkholderia | 7 (8) | 18 |
TF | Proteobacteria/Beta | MetR - Ralstonia | 6 (6) | 12 |
TF | Proteobacteria/Gamma | MetJ - Alteromonadales | 9 (9) | 110 |
TF | Proteobacteria/Gamma | MetJ - Enterobacteriales | 12 (12) | 167 |
TF | Proteobacteria/Gamma | MetJ - Pasteurellales | 9 (9) | 50 |
TF | Proteobacteria/Gamma | MetJ - Psychromonadaceae/Aeromonadales | 6 (6) | 84 |
TF | Proteobacteria/Gamma | MetJ - Vibrionales | 10 (10) | 218 |
TF | Proteobacteria/Gamma | MetR - Alteromonadales | 4 (9) | 15 |
TF | Proteobacteria/Gamma | MetR - Enterobacteriales | 12 (12) | 140 |
TF | Proteobacteria/Gamma | MetR - Oceanospirillales/Alteromonadales | 12 (12) | 46 |
TF | Proteobacteria/Gamma | MetR - Pasteurellales | 8 (9) | 40 |
TF | Proteobacteria/Gamma | MetR - Pseudomonadaceae | 8 (8) | 44 |
TF | Proteobacteria/Gamma | MetR - Psychromonadaceae/Aeromonadales | 5 (6) | 13 |
TF | Proteobacteria/Gamma | MetR - Shewanellaceae | 16 (16) | 117 |
TF | Proteobacteria/Gamma | MetR - Vibrionales | 10 (10) | 57 |
TF | Proteobacteria/beta | MetR - Comamonadaceae | 5 (11) | 13 |
TF | Proteobacteria/beta | MetR - Various betaproteobacteria | 8 (12) | 19 |
TF | Proteobacteria/gamma | MetJ - Shewanellaceae | 16 (16) | 397 |
TF | Proteobacteria/gamma | MetR - Xanthomonadales | 3 (4) | 6 |
RNA | Actinobacteria | SAM - Corynebacteriaceae | 1 (8) | 1 |
RNA | Chlorobiales | SAM - Chlorobiales | 11 (11) | 14 |
RNA | Chloroflexi | SAM - Chloroflexia | 5 (5) | 14 |
RNA | Cyanobacteria | SAM - Cyanobacteria | 2 (14) | 2 |
RNA | Deinococcus-Thermus | SAM - Deinococcus-Thermus | 5 (5) | 9 |
RNA | Firmicutes | SAM - Bacillales | 11 (11) | 98 |
RNA | Firmicutes | SAM - Clostridiaceae | 19 (20) | 72 |
RNA | Firmicutes | SAM - Lactobacillaceae | 2 (15) | 2 |
RNA | Firmicutes | SAM - Staphylococcaceae | 7 (7) | 40 |
RNA | Proteobacteria | SAM_alpha - Rhizobiales | 14 (15) | 25 |
RNA | Proteobacteria | SAM_alpha - Rhodobacterales | 14 (15) | 14 |
RNA | Proteobacteria/delta | SAM - Desulfovibrionales | 4 (10) | 4 |
RNA | Thermotogae | SAM - Thermotogales | 1 (11) | 1 |