Regulog MetR - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | 2 | 2 |
| Ralstonia pickettii 12J | 2 | 2 |
| Ralstonia metallidurans CH34 | 2 | 2 |
| Ralstonia eutropha JMP134 | 2 | 2 |
| Ralstonia eutropha H16 | 2 | 2 |
| Cupriavidus taiwanensis | 2 | 2 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| metE |
*
Ralstonia solanacearum GMI1000 Site: position = -94 score = 5.52566 sequence = TATGAATTCAATTCAAC Gene: RSp0676: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Ralstonia pickettii 12J Site: position = -105 score = 5.8919 sequence = TATGAATTGAATTCAAA Gene: Rpic_4542: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Ralstonia metallidurans CH34 Site: position = -102 score = 5.39559 sequence = TATGAATTTCATTCACT Gene: Rmet_4564: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Ralstonia eutropha JMP134 Site: position = -66 score = 5.92477 sequence = TATGAAATTCATTCATA Gene: Reut_B4245: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Ralstonia eutropha H16 Site: position = -96 score = 5.71952 sequence = TATGAAACTCATTCATA Gene: H16_B1581: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
*
Cupriavidus taiwanensis Site: position = -96 score = 5.86106 sequence = TATGAAATTGATTCATA Gene: RALTA_B1420: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
| CRON 2. | |||||||
| metR |
*
Ralstonia solanacearum GMI1000 Site: position = -38 score = 5.52566 sequence = GTTGAATTGAATTCATA Gene: RSp0677: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Ralstonia pickettii 12J Site: position = -32 score = 5.8919 sequence = TTTGAATTCAATTCATA Gene: Rpic_4541: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Ralstonia metallidurans CH34 Site: position = -36 score = 5.39559 sequence = AGTGAATGAAATTCATA Gene: Rmet_4563: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Ralstonia eutropha JMP134 Site: position = -54 score = 5.92477 sequence = TATGAATGAATTTCATA Gene: Reut_B4244: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Ralstonia eutropha H16 Site: position = -51 score = 5.71952 sequence = TATGAATGAGTTTCATA Gene: H16_B1580: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
*
Cupriavidus taiwanensis Site: position = -51 score = 5.86106 sequence = TATGAATCAATTTCATA Gene: RALTA_B1419: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |