Regulog SAM - Clostridiaceae
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Clostridium kluyveri DSM 555 | 42 | 18 |
| Clostridium sp. SS2/1 | ||
| Clostridium cellulolyticum H10 | 1 | 1 |
| Clostridium phytofermentans ISDg | 1 | 1 |
| Clostridium tetani E88 | 7 | 4 |
| Clostridium acetobutylicum ATCC 824 | 9 | 6 |
| Clostridium botulinum A str. ATCC 3502 | 11 | 5 |
| Clostridium novyi NT | 6 | 3 |
| Clostridium perfringens ATCC 13124 | 2 | 2 |
| Clostridium difficile 630 | 11 | 6 |
| Clostridium beijerincki NCIMB 8052 | 9 | 5 |
| Clostridium sp. OhILAs | 7 | 4 |
| Clostridium sp. L2-50 | 1 | 1 |
| Clostridium scindens ATCC 35704 | 1 | 1 |
| Clostridium nexile DSM 1787 | 1 | 1 |
| Clostridium leptum DSM 753 | 1 | 1 |
| Clostridium hiranonis DSM 13275 | 7 | 3 |
| Clostridium butyricum 5521 | 7 | 4 |
| Clostridium bolteae ATCC BAA-613 | 1 | 1 |
| Clostridium bartlettii DSM 16795 | 6 | 4 |
| Genes | Function | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||||||||
| metY |
*3
Clostridium kluyveri DSM 555 Site: position = -306 score = 92.53 sequence = TTTCTTATCAAGAGT... Gene: CKL_2180: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CKL_2187: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Site: position = -268 score = 97.0 sequence = CTTCTTATCCAGAGA... Gene: CKL_0975: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
2
Clostridium sp. SS2/1 Gene: CLOSS21_01861: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CLOSS21_01137: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
3
Clostridium cellulolyticum H10 Gene: Ccel_3332: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: Ccel_3332: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: Ccel_1962: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
2
Clostridium phytofermentans ISDg Gene: null: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: null: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*
Clostridium tetani E88 Site: position = -67 score = 105.82 sequence = TATCTTATCAAGAGC... Gene: CTC01153: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*
Clostridium acetobutylicum ATCC 824 Site: position = -224 score = 93.6 sequence = GGTCTTATCAAGAGA... Gene: CAC2783: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -231 score = 85.29 sequence = GCTCTTATCAAGAGT... Gene: CBO1876: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*
Clostridium novyi NT Site: position = -203 score = 99.7 sequence = TCTTATCAAGAGTGG... Gene: NT01CX_1210: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
|
*
Clostridium difficile 630 Site: position = -211 score = 87.32 sequence = TCTTATCCAGAGAGG... Gene: CD1825: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*4
Clostridium beijerincki NCIMB 8052 Site: position = -312 score = 92.37 sequence = TTTTATCAAGAAAGG... Gene: Cbei_0766: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: Cbei_0609: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: Cbei_0622: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: Cbei_0609: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
|
2
Clostridium sp. L2-50 Gene: CLOL250_00385: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CLOL250_02586: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
2
Clostridium scindens ATCC 35704 Gene: CLOSCI_00365: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CLOSCI_00606: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
2
Clostridium nexile DSM 1787 Gene: CLONEX_01596: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CLONEX_03146: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
2
Clostridium leptum DSM 753 Gene: CLOLEP_01551: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CLOLEP_01511: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
Gene: CLOHIR_02115: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*2
Clostridium butyricum 5521 Site: position = -317 score = 79.62 sequence = TTTTATCAAGAAAGA... Gene: CBY_4078: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CBY_3004: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_04232: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Gene: CLOBOL_04741: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
*2
Clostridium bartlettii DSM 16795 Gene: CLOBAR_00598: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Site: position = -257 score = 84.26 sequence = ATTCTTATCAAGAGA... Gene: CLOBAR_02816: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) |
| hom |
Gene: CKL_0859: Homoserine dehydrogenase (EC 1.1.1.3) |
|
|
|
|
|
Gene: CBO1875: Homoserine dehydrogenase (EC 1.1.1.3) |
|
|
*2
Clostridium difficile 630 Site: position = -208 score = 91.03 sequence = TCTTATCAAGAGTGG... Gene: CD1166: Homoserine dehydrogenase (EC 1.1.1.3) Gene: CD1580: Homoserine dehydrogenase (EC 1.1.1.3) |
|
*
Clostridium sp. OhILAs Site: position = -492 score = 30.74 sequence = ATCTTTATCCAGAGT... Gene: Clos_2186: Homoserine dehydrogenase (EC 1.1.1.3) |
|
|
|
|
|
|
|
Gene: CLOBAR_01685: Homoserine dehydrogenase (EC 1.1.1.3) |
Homoserine dehydrogenase (EC 1.1.1.3) |
| metA |
*2
Clostridium kluyveri DSM 555 Site: position = -249 score = 92.42 sequence = TCTTATCAAGAGCGG... Gene: CKL_1631: Homoserine O-succinyltransferase (EC 2.3.1.46) Gene: CKL_1609: Homoserine O-succinyltransferase (EC 2.3.1.46) |
|
Gene: Ccel_3331: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: null: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CTC01152: Homoserine O-succinyltransferase (EC 2.3.1.46) |
*
Clostridium acetobutylicum ATCC 824 Site: position = -199 score = 83.79 sequence = TCTTATCAAGAAGGT... Gene: CAC1825: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CBO1874: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: NT01CX_1211: Homoserine O-succinyltransferase (EC 2.3.1.46) |
|
Gene: CD1826: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: Cbei_1279: Homoserine O-succinyltransferase (EC 2.3.1.46) |
|
Gene: CLOL250_02767: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CLOSCI_01254: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CLONEX_00225: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CLOLEP_02491: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CLOHIR_02116: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CBY_3418: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CLOBOL_00671: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Gene: CLOBAR_01977: Homoserine O-succinyltransferase (EC 2.3.1.46) |
Homoserine O-succinyltransferase (EC 2.3.1.46) |
| COG2606 |
*
Clostridium kluyveri DSM 555 Site: position = -207 score = 88.59 sequence = ATTCTTATTTTGAGA... Gene: CKL_3334: YbaK family protein |
|
|
|
|
|
Gene: CBO1775: YbaK family protein |
|
|
|
|
Gene: Clos_2185: YbaK family protein |
|
|
|
|
|
|
|
|
YbaK family protein |
| CRON 2. | |||||||||||||||||||||
| metF |
|
Gene: CLOSS21_00443: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
Gene: null: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -225 score = 95.99 sequence = ACTTATCAAGAGAGG... Gene: CBO1621: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
|
|
|
*
Clostridium sp. OhILAs Site: position = -274 score = 89.33 sequence = TTTTATCGAGAGAGG... Site: position = -450 score = 93.43 sequence = ACTTATCAAGAGAGG... Gene: Clos_0078: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
2
Clostridium scindens ATCC 35704 Gene: CLOSCI_00437: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Gene: CLOSCI_03150: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
Gene: CLONEX_02976: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
|
|
2
Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05129: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Gene: CLOBOL_06013: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
| msd |
|
Gene: CLOSS21_00444: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: Ccel_1861: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: null: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: CTC01807: Methionine synthase activation domain (EC 2.1.1.13) |
|
Gene: CBO1622: Methionine synthase activation domain (EC 2.1.1.13) |
|
Gene: CPF_1670: Methionine synthase activation domain (EC 2.1.1.13) |
2
Clostridium difficile 630 Gene: CD1734: Methionine synthase activation domain (EC 2.1.1.13) Gene: CD3597: Methionine synthase activation domain (EC 2.1.1.13) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -266 score = 92.68 sequence = ACTTATCAAGAGTGG... Gene: Cbei_1401: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: Clos_0079: Methionine synthase activation domain (EC 2.1.1.13) |
|
Gene: CLOSCI_00438: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: CLONEX_02975: Methionine synthase activation domain (EC 2.1.1.13) |
|
Gene: CLOHIR_02204: Methionine synthase activation domain (EC 2.1.1.13) |
*
Clostridium butyricum 5521 Site: position = -289 score = 91.18 sequence = ACTTATCAAGAGTGG... Gene: CBY_0038: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: CLOBOL_06012: Methionine synthase activation domain (EC 2.1.1.13) |
Gene: CLOBAR_00201: Methionine synthase activation domain (EC 2.1.1.13) |
Methionine synthase activation domain (EC 2.1.1.13) |
| metH |
Gene: CKL_0976: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CLOSS21_00445: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
|
Gene: null: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CTC01806: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
*
Clostridium acetobutylicum ATCC 824 Site: position = -181 score = 88.64 sequence = AATCTTATCAAGAGT... Gene: CAC0578: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CBO1623: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: NT01CX_2109: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
|
Gene: CD3596: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_1402: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Gene: Cbei_3100: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: Clos_0080: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CLOL250_00227: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CLOSCI_00439: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CLONEX_02974: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
|
Gene: CLOHIR_02205: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CBY_0039: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CLOBOL_06010: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
Gene: CLOBAR_00202: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
| rhc |
Gene: CKL_1558: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
|
|
Gene: null: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
|
Gene: CAC2942: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CBO0725: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
|
Gene: CPF_0171: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
*
Clostridium difficile 630 Site: position = -183 score = 33.29 sequence = ATACTTATCAAGAGT... Gene: CD3598: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: Cbei_1237: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: Clos_1075: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CLOL250_01391: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CLOSCI_01289: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CLONEX_03062: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CLOLEP_00535: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
*
Clostridium hiranonis DSM 13275 Site: position = -167 score = 20.71 sequence = ACTTATCAAGAATCG... Gene: CLOHIR_02203: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CBY_0312: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CLOBOL_01686: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
Gene: CLOBAR_00200: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
| CRON 3. | |||||||||||||||||||||
| metN |
*
Clostridium kluyveri DSM 555 Site: position = -184 score = 85.32 sequence = ACTTATCAAGAGAGG... Gene: CKL_0665: Methionine ABC transporter ATP-binding protein |
|
|
|
*
Clostridium tetani E88 Site: position = -177 score = 79.63 sequence = AAGCTTATTAAGAGC... Gene: CTC01355: Methionine ABC transporter ATP-binding protein |
*
Clostridium acetobutylicum ATCC 824 Site: position = -182 score = 87.61 sequence = ACTTATCAAGAGAGG... Gene: CAC0984: Methionine ABC transporter ATP-binding protein |
*2
Clostridium botulinum A str. ATCC 3502 Gene: CBO1499: Methionine ABC transporter ATP-binding protein Site: position = -206 score = 96.89 sequence = TCTTATCAAGAGCGG... Gene: CBO1084: Methionine ABC transporter ATP-binding protein |
*
Clostridium novyi NT Site: position = -181 score = 92.2 sequence = AGTCTTATCAAGAGA... Gene: NT01CX_0186: Methionine ABC transporter ATP-binding protein |
|
*
Clostridium difficile 630 Site: position = -211 score = 91.23 sequence = TCTTATCAAGAGTGG... Gene: CD1489: Methionine ABC transporter ATP-binding protein |
*
Clostridium beijerincki NCIMB 8052 Site: position = -261 score = 84.18 sequence = TCTTATCGAGAGCGG... Gene: Cbei_0636: Methionine ABC transporter ATP-binding protein |
|
|
Gene: CLOSCI_01799: Methionine ABC transporter ATP-binding protein |
|
|
*
Clostridium hiranonis DSM 13275 Site: position = -203 score = 87.46 sequence = TCTTATCAAGAGAGG... Gene: CLOHIR_00307: Methionine ABC transporter ATP-binding protein |
|
|
*
Clostridium bartlettii DSM 16795 Site: position = -277 score = 95.9 sequence = ACTCTTATCAAGAGT... Gene: CLOBAR_00998: Methionine ABC transporter ATP-binding protein |
Methionine ABC transporter ATP-binding protein |
| metP |
Gene: CKL_0666: Methionine ABC transporter permease protein |
|
|
|
Gene: CTC01353: Methionine ABC transporter permease protein |
Gene: CAC0985: Methionine ABC transporter permease protein |
2
Clostridium botulinum A str. ATCC 3502 Gene: CBO1500: Methionine ABC transporter permease protein Gene: CBO1085: Methionine ABC transporter permease protein |
Gene: NT01CX_0185: Methionine ABC transporter permease protein |
|
Gene: CD1490: Methionine ABC transporter permease protein |
Gene: Cbei_0637: Methionine ABC transporter permease protein |
|
|
Gene: CLOSCI_01798: Methionine ABC transporter permease protein |
|
|
Gene: CLOHIR_00308: Methionine ABC transporter permease protein |
Gene: CBY_3700: Methionine ABC transporter permease protein |
|
Gene: CLOBAR_00997: Methionine ABC transporter permease protein |
Methionine ABC transporter permease protein |
| metQ |
*
Clostridium kluyveri DSM 555 Site: position = -184 score = 85.95 sequence = AGCTTTATCAAGAGC... Gene: CKL_2913: Methionine ABC transporter substrate-binding protein |
|
|
|
Gene: CTC01352: Methionine ABC transporter substrate-binding protein |
Gene: CAC0986: Methionine ABC transporter substrate-binding protein |
2
Clostridium botulinum A str. ATCC 3502 Gene: CBO1501: Methionine ABC transporter substrate-binding protein Gene: CBO1086: Methionine ABC transporter substrate-binding protein |
Gene: NT01CX_0184: Methionine ABC transporter substrate-binding protein |
|
Gene: CD1491: Methionine ABC transporter substrate-binding protein |
Gene: Cbei_0638: Methionine ABC transporter substrate-binding protein |
|
|
|
|
|
Gene: CLOHIR_00309: Methionine ABC transporter substrate-binding protein |
Gene: CBY_3699: Methionine ABC transporter substrate-binding protein |
|
Gene: CLOBAR_00996: Methionine ABC transporter substrate-binding protein |
Methionine ABC transporter substrate-binding protein |
| CRON 4. | |||||||||||||||||||||
| metK |
*2
Clostridium kluyveri DSM 555 Site: position = -256 score = 96.32 sequence = TTTCTTATCAAGAGA... Gene: CKL_1633: S-adenosylmethionine synthetase (EC 2.5.1.6) Site: position = -175 score = 99.0 sequence = GCTCTTATCAAGAGA... Gene: CKL_3674: S-adenosylmethionine synthetase (EC 2.5.1.6) |
Gene: CLOSS21_02055: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium cellulolyticum H10 Site: position = -197 score = 92.72 sequence = CCTTATCAAGAGAGG... Gene: Ccel_0087: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium phytofermentans ISDg Site: position = -242 score = 61.96 sequence = TCTCTTATTCAGAGT... Gene: null: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium tetani E88 Site: position = -187 score = 99.61 sequence = TCTTATCGAGAGAGG... Gene: CTC00321: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium acetobutylicum ATCC 824 Site: position = -179 score = 94.92 sequence = ACTCTTATCAAGAGA... Gene: CAC2856: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -180 score = 94.72 sequence = TCTTATCAAGAGAGG... Gene: CBO0168: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium novyi NT Site: position = -176 score = 95.45 sequence = CATCTTATCAAGAGA... Gene: NT01CX_0516: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium perfringens ATCC 13124 Site: position = -355 score = 92.52 sequence = ACTCTTATCCAGAGA... Gene: CPF_2435: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium difficile 630 Site: position = -239 score = 95.64 sequence = CCTTATCAAGAGAGG... Gene: CD0130: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -333 score = 88.51 sequence = TCTTATCAAGAGAGG... Gene: Cbei_0428: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium sp. OhILAs Site: position = -367 score = 90.0 sequence = TGCCTTATCAAGAGC... Gene: Clos_2531: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium sp. L2-50 Site: position = -278 score = 43.96 sequence = GCTCTTATTCAGAAT... Gene: CLOL250_01292: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium scindens ATCC 35704 Site: position = -263 score = 57.22 sequence = TCTCTTATTCAGAGC... Gene: CLOSCI_00966: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*2
Clostridium nexile DSM 1787 Gene: CLONEX_03443: S-adenosylmethionine synthetase (EC 2.5.1.6) Site: position = -212 score = 63.66 sequence = TCTTATTCAGAGTGG... Gene: CLONEX_00524: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium leptum DSM 753 Site: position = -35 score = 79.84 sequence = CCTTATCAAGAGAGG... Gene: CLOLEP_01532: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium hiranonis DSM 13275 Site: position = -292 score = 96.76 sequence = CCTTATCAAGAGAGG... Gene: CLOHIR_00024: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium butyricum 5521 Site: position = -295 score = 91.07 sequence = TCTTATCAAGAGAGG... Gene: CBY_1316: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium bolteae ATCC BAA-613 Site: position = -215 score = 45.97 sequence = TCCCTTATTCAGAGT... Gene: CLOBOL_06841: S-adenosylmethionine synthetase (EC 2.5.1.6) |
*
Clostridium bartlettii DSM 16795 Site: position = -303 score = 97.84 sequence = TACCTTATCAAGAGA... Gene: CLOBAR_00743: S-adenosylmethionine synthetase (EC 2.5.1.6) |
S-adenosylmethionine synthetase (EC 2.5.1.6) |
| CRON 5. | |||||||||||||||||||||
| metT |
|
|
|
Gene: null: Methionine transporter MetT |
*
Clostridium tetani E88 Site: position = -160 score = 104.88 sequence = ATTCTTATCAAGAGA... Gene: CTC02520: Methionine transporter MetT |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -248 score = 88.44 sequence = ATTCTTATCCAGAGC... Gene: CBO3402: Methionine transporter MetT |
Gene: NT01CX_1252: Methionine transporter MetT |
*
Clostridium perfringens ATCC 13124 Site: position = -264 score = 67.49 sequence = ATCTTATCAAGAGAG... Gene: CPF_2617: Methionine transporter MetT |
|
|
|
|
2
Clostridium scindens ATCC 35704 Gene: CLOSCI_03562: Methionine transporter MetT Gene: CLOSCI_01853: Methionine transporter MetT |
Gene: CLONEX_03205: Methionine transporter MetT |
|
|
|
Gene: CLOBOL_02001: Methionine transporter MetT |
|
Methionine transporter MetT |
| CRON 6. | |||||||||||||||||||||
| metI |
|
Gene: CLOSS21_00606: Cystathionine gamma-synthase (EC 2.5.1.48) |
|
|
|
*
Clostridium acetobutylicum ATCC 824 Site: position = -177 score = 98.81 sequence = TCTTATCAAGAGTGA... Gene: CAC0390: Cystathionine gamma-synthase (EC 2.5.1.48) |
|
|
|
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -254 score = 85.37 sequence = TCTTATTAAGAGCGG... Gene: Cbei_0239: Cystathionine gamma-synthase (EC 2.5.1.48) |
|
Gene: CLOL250_02205: Cystathionine gamma-synthase (EC 2.5.1.48) |
|
|
|
|
|
|
|
Cystathionine gamma-synthase (EC 2.5.1.48) |
| metC |
|
|
|
|
|
Gene: CAC0391: Cystathionine beta-lyase (EC 4.4.1.8) |
|
|
|
|
Gene: Cbei_0240: Cystathionine beta-lyase (EC 4.4.1.8) |
|
|
|
|
|
|
|
|
|
Cystathionine beta-lyase (EC 4.4.1.8) |
| CRON 7. | |||||||||||||||||||||
| metQ2 |
|
|
|
|
|
|
|
|
|
*
Clostridium difficile 630 Site: position = -219 score = 90.54 sequence = CTTCTTATCCAGAGT... Gene: CD1653: Methionine ABC transporter substrate-binding protein |
|
|
|
|
|
|
|
|
|
*
Clostridium bartlettii DSM 16795 Site: position = -218 score = 93.9 sequence = AGTCTTATCAAGAGC... Gene: CLOBAR_01632: Methionine ABC transporter substrate-binding protein |
Methionine ABC transporter substrate-binding protein |
| CRON 8. | |||||||||||||||||||||
| sbpA |
*
Clostridium kluyveri DSM 555 Site: position = -388 score = 101.22 sequence = CTTCTTATCAAGAGA... Gene: CKL_1803: Sulfate-binding protein Sbp |
Gene: CLOSS21_01836: Sulfate-binding protein Sbp |
|
Gene: null: Sulfate-binding protein Sbp |
|
|
|
|
|
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4194: Sulfate-binding protein Sbp Gene: Cbei_4193: Sulfate-binding protein Sbp |
|
|
|
|
|
|
|
|
|
Sulfate-binding protein Sbp |
| cysT |
Gene: CKL_1802: Sulfate transport system permease protein CysT |
Gene: CLOSS21_01835: Sulfate transport system permease protein CysT |
|
Gene: null: Sulfate transport system permease protein CysT |
|
|
|
|
|
|
Gene: Cbei_4192: Sulfate transport system permease protein CysT |
|
|
|
|
|
|
Gene: CBY_3239: Sulfate transport system permease protein CysT |
|
|
Sulfate transport system permease protein CysT |
| cysW |
Gene: CKL_1801: Sulfate transport system permease protein CysW |
Gene: CLOSS21_01834: Sulfate transport system permease protein CysW |
|
Gene: null: Sulfate transport system permease protein CysW |
|
|
|
|
|
|
Gene: Cbei_4191: Sulfate transport system permease protein CysW |
|
|
|
|
|
|
Gene: CBY_3240: Sulfate transport system permease protein CysW |
|
|
Sulfate transport system permease protein CysW |
| cysA |
Gene: CKL_1800: Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) |
Gene: CLOSS21_01833: Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) |
|
Gene: null: Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) |
|
|
|
|
|
|
Gene: Cbei_4190: Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) |
|
|
|
|
|
|
Gene: CBY_3241: Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) |
|
|
Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) |
| cysC |
Gene: CKL_1799: Adenylylsulfate kinase (EC 2.7.1.25) |
|
|
|
|
Gene: CAC0103: Adenylylsulfate kinase (EC 2.7.1.25) |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Adenylylsulfate kinase (EC 2.7.1.25) |
| aprA |
Gene: CKL_1798: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
Gene: CLOSS21_01832: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
|
Gene: null: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
|
Gene: CAC0104: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
|
|
|
|
Gene: Cbei_4189: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
|
|
|
|
|
|
Gene: CBY_3242: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
|
|
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2) |
| CKL_1797 |
Gene: CKL_1797: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
Gene: CLOSS21_01831: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
|
Gene: null: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
|
Gene: CAC0105: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
|
|
|
|
Gene: Cbei_4188: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
|
|
|
|
|
|
Gene: CBY_3243: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
|
|
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2) |
| cysH |
Gene: CKL_1796: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
Gene: CLOSS21_01830: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
|
Gene: null: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
|
Gene: CAC0109: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
|
|
|
|
Gene: Cbei_4187: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
|
|
|
|
|
|
Gene: CBY_3244: Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
|
|
Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) |
| cysN |
Gene: CKL_1795: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
Gene: CLOSS21_01829: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
|
Gene: null: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
|
Gene: CAC0110: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
|
|
|
|
Gene: Cbei_4186: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
|
|
|
|
|
|
Gene: CBY_3245: Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
|
|
Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) |
| CRON 9. | |||||||||||||||||||||
| CKL_1307 |
*
Clostridium kluyveri DSM 555 Site: position = -244 score = 100.17 sequence = CTTCTTATCCAGAGT... Gene: CKL_1307: hypothetical protein |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
hypothetical protein |
| CRON 10. | |||||||||||||||||||||
| nifB |
*
Clostridium kluyveri DSM 555 Site: position = -276 score = 95.17 sequence = TCTTATCAAGAGAGG... Gene: CKL_1036: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
|
|
|
|
|
|
|
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0627: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB Gene: Cbei_0628: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
|
|
|
|
|
|
|
|
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
| tauC |
2
Clostridium kluyveri DSM 555 Gene: CKL_1041: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Gene: CKL_1037: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|
|
|
|
|
|
|
|
|
3
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0615: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Gene: Cbei_0614: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Gene: Cbei_0618: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|
|
|
|
|
|
|
|
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
| tauA |
Gene: CKL_1038: Alkanesulfonates-binding protein |
|
|
|
|
|
|
|
|
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0611: Alkanesulfonates-binding protein Gene: Cbei_0616: Alkanesulfonates-binding protein |
|
|
|
|
|
|
|
|
|
Alkanesulfonates-binding protein |
| tauB |
Gene: CKL_1039: Taurine transport ATP-binding protein TauB |
|
|
|
|
|
|
|
|
|
Gene: Cbei_0610: Taurine transport ATP-binding protein TauB |
|
|
|
|
|
|
|
|
|
Taurine transport ATP-binding protein TauB |
| tauC1 |
Gene: CKL_1040: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|
|
|
|
|
|
|
|
|
Gene: Cbei_0617: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|
|
|
|
|
|
|
|
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
| nifD |
5
Clostridium kluyveri DSM 555 Gene: CKL_1042: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: CKL_1034: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: CKL_2781: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: CKL_2780: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: CKL_1043: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
|
|
|
|
|
|
|
|
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0631: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) Gene: Cbei_0612: Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
|
|
|
|
|
|
|
|
|
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) |
| nifK |
2
Clostridium kluyveri DSM 555 Gene: CKL_1035: Nitrogenase molybdenum-iron protein beta chain (EC 1.18.6.1) Gene: CKL_1044: Nitrogenase molybdenum-iron protein beta chain (EC 1.18.6.1) |
|
|
|
|
|
|
|
|
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0613: Nitrogenase molybdenum-iron protein beta chain (EC 1.18.6.1) Gene: Cbei_0632: Nitrogenase molybdenum-iron protein beta chain (EC 1.18.6.1) |
|
|
|
|
|
|
|
|
|
Nitrogenase molybdenum-iron protein beta chain (EC 1.18.6.1) |
| metN3 |
*
Clostridium kluyveri DSM 555 Site: position = -307 score = 85.78 sequence = ACTTATTAAGAGAGG... Gene: CKL_0822: Methionine ABC transporter ATP-binding protein |
|
|
|
|
|
|
|
|
|
Gene: Cbei_0624: Methionine ABC transporter ATP-binding protein |
|
Gene: CLOL250_01734: Methionine ABC transporter ATP-binding protein |
|
|
|
|
|
Gene: CLOBOL_00536: Methionine ABC transporter ATP-binding protein |
|
Methionine ABC transporter ATP-binding protein |
| metP3 |
Gene: CKL_0823: Methionine ABC transporter permease protein |
|
|
|
|
|
|
|
|
|
Gene: Cbei_0625: Methionine ABC transporter permease protein |
|
Gene: CLOL250_01735: Methionine ABC transporter permease protein |
|
|
|
|
|
Gene: CLOBOL_00535: Methionine ABC transporter permease protein |
|
Methionine ABC transporter permease protein |
| metQ3 |
Gene: CKL_0824: Methionine ABC transporter substrate-binding protein |
|
|
|
|
|
|
|
|
|
Gene: Cbei_0626: Methionine ABC transporter substrate-binding protein |
|
Gene: CLOL250_01736: Methionine ABC transporter substrate-binding protein |
|
|
|
|
|
Gene: CLOBOL_00534: Methionine ABC transporter substrate-binding protein |
|
Methionine ABC transporter substrate-binding protein |
| CKL_2782 |
*
Clostridium kluyveri DSM 555 Site: position = -330 score = 71.53 sequence = ATTCTTATCAAGAGA... Gene: CKL_2782: hypothetical protein |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
hypothetical protein |
| nifH |
*
Clostridium kluyveri DSM 555 Site: position = -310 score = 97.62 sequence = TCTTATCAAGAGAGG... Gene: CKL_1033: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH |
| CRON 11. | |||||||||||||||||||||
| tlpB |
*
Clostridium kluyveri DSM 555 Site: position = -186 score = 95.31 sequence = GCTCTTATCACGAGA... Gene: CKL_1794: Methyl-accepting chemotaxis protein tlpB |
|
|
|
|
|
Gene: CBO0437: Methyl-accepting chemotaxis protein tlpB |
|
|
|
|
Gene: Clos_0052: Methyl-accepting chemotaxis protein tlpB |
|
|
|
|
|
|
|
|
Methyl-accepting chemotaxis protein tlpB |
| CRON 12. | |||||||||||||||||||||
| CD2172 |
*
Clostridium kluyveri DSM 555 Site: position = -223 score = 93.33 sequence = GTTCTTATCAAGAGA... Gene: CKL_3054: Amino acid ABC transporter, ATP-binding protein |
|
|
|
|
|
|
|
Gene: CPF_2349: Amino acid ABC transporter, ATP-binding protein |
Gene: CD2172: Amino acid ABC transporter, ATP-binding protein |
|
|
|
Gene: CLOSCI_03145: Amino acid ABC transporter, ATP-binding protein |
|
|
|
|
Gene: CLOBOL_06791: Amino acid ABC transporter, ATP-binding protein |
|
Amino acid ABC transporter, ATP-binding protein |
| CRON 13. | |||||||||||||||||||||
| metQ4 |
|
|
|
|
|
|
|
|
|
|
|
*
Clostridium sp. OhILAs Site: position = -310 score = 92.19 sequence = ACTCTTATCGAGAGC... Gene: Clos_0544: Methionine ABC transporter substrate-binding protein |
|
|
|
|
|
|
|
|
Methionine ABC transporter substrate-binding protein |
| CRON 14. | |||||||||||||||||||||
| nifB |
*
Clostridium kluyveri DSM 555 Site: position = -415 score = 91.03 sequence = TCTTATCAAGAGCGG... Gene: CKL_0525: Nitrogenase FeMo-cofactor scaffold and assembly protein NifN / Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN / Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB |
| cysK |
Gene: CKL_0526: Cysteine synthase (EC 2.5.1.47) |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Cysteine synthase (EC 2.5.1.47) |
| CRON 15. | |||||||||||||||||||||
| metQ5 |
|
Gene: CLOSS21_00139: Methionine ABC transporter, substrate-binding component |
|
Gene: null: Methionine ABC transporter, substrate-binding component |
|
|
|
|
|
|
|
|
|
|
|
|
|
*
Clostridium butyricum 5521 Site: position = -337 score = 89.96 sequence = CAACTTATCAAGAGT... Gene: CBY_2058: Methionine ABC transporter, substrate-binding component |
|
|
Methionine ABC transporter, substrate-binding component |
| metN5 |
|
Gene: CLOSS21_00140: Methionine ABC transporter, ATP-binding component |
|
Gene: null: Methionine ABC transporter, ATP-binding component |
|
|
|
|
|
|
|
|
|
|
|
|
|
Gene: CBY_2057: Methionine ABC transporter, ATP-binding component |
|
|
Methionine ABC transporter, ATP-binding component |
| metP5 |
|
Gene: CLOSS21_00141: Methionine ABC transporter, permease component |
|
Gene: null: Methionine ABC transporter, permease component |
|
|
|
|
|
|
|
|
|
|
|
|
|
Gene: CBY_2056: Methionine ABC transporter, permease component |
|
|
Methionine ABC transporter, permease component |
| CRON 16. | |||||||||||||||||||||
| Cbei_0619 |
*
Clostridium kluyveri DSM 555 Site: position = -185 score = 89.35 sequence = CCTTATCAAGAGAAA... Gene: CKL_0827: hypothetical protein |
|
|
|
|
|
|
|
|
|
Gene: Cbei_0619: hypothetical protein |
|
|
|
|
|
|
|
|
|
hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |