Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SAM in Clostridium sp. OhILAs

Properties
Regulator type: RNA regulatory element
Name: SAM
RFAM: RF00162
Regulation mode:
Biological process: Methionine biosynthesis
Effector: S-adenosylmethionine
Regulog: SAM - Clostridiaceae
Under regulation:
- Genes 7
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -310
Score: 92.2
Sequence: ACTCTTATCGAGAGC...
Locus tag: Clos_0544
Name: metQ4
Funciton: Methionine ABC transporter substrate-binding protein
Clos_0544
metQ4
Methionine ABC transporter substrate-binding protein
Position: -450
Score: 93.4
Sequence: ACTTATCAAGAGAGG...
Position: -274
Score: 89.3
Sequence: TTTTATCGAGAGAGG...
Locus tag: Clos_0078
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Locus tag: Clos_0079
Name: msd
Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: Clos_0080
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Clos_0078
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Clos_0079
msd
Methionine synthase activation domain (EC 2.1.1.13)
Clos_0080
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -492
Score: 30.7
Sequence: ATCTTTATCCAGAGT...
Locus tag: Clos_2186
Name: hom
Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: Clos_2185
Name: COG2606
Funciton: YbaK family protein
Clos_2186
hom
Homoserine dehydrogenase (EC 1.1.1.3)
Clos_2185
COG2606
YbaK family protein
Position: -367
Score: 90
Sequence: TGCCTTATCAAGAGC...
Locus tag: Clos_2531
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
Clos_2531
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise