Regulon of SAM in Clostridium sp. OhILAs
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | SAM - Clostridiaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -310
Score: 92.2 Sequence: ACTCTTATCGAGAGC...
Locus tag: Clos_0544
Name: metQ4 Funciton: Methionine ABC transporter substrate-binding protein |
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metQ4
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Methionine ABC transporter substrate-binding protein
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Position: -450
Score: 93.4 Sequence: ACTTATCAAGAGAGG...
Position: -274
Score: 89.3 Sequence: TTTTATCGAGAGAGG...
Locus tag: Clos_0078
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Locus tag: Clos_0079
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: Clos_0080
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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msd
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Methionine synthase activation domain (EC 2.1.1.13)
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -492
Score: 30.7 Sequence: ATCTTTATCCAGAGT...
Locus tag: Clos_2186
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: Clos_2185
Name: COG2606 Funciton: YbaK family protein |
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hom
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Homoserine dehydrogenase (EC 1.1.1.3)
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COG2606
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YbaK family protein
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Position: -367
Score: 90 Sequence: TGCCTTATCAAGAGC...
Locus tag: Clos_2531
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |