Regulon of SAM in Clostridium difficile 630
| Regulator type: | RNA regulatory element |
| Name: | SAM |
| RFAM: | RF00162 |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | SAM - Clostridiaceae |
| Under regulation: | |
| - Genes | 11 |
| - Operons | 6 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - SAM
- By effector - S-adenosylmethionine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -219
Score: 90.5 Sequence: CTTCTTATCCAGAGT...
Locus tag: CD1653
Name: metQ2 Funciton: Methionine ABC transporter substrate-binding protein |
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metQ2
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Methionine ABC transporter substrate-binding protein
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Position: -211
Score: 91.2 Sequence: TCTTATCAAGAGTGG...
Locus tag: CD1489
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: CD1490
Name: metP Funciton: Methionine ABC transporter permease protein
Locus tag: CD1491
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein |
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metN
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Methionine ABC transporter ATP-binding protein
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metP
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Methionine ABC transporter permease protein
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metQ
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Methionine ABC transporter substrate-binding protein
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Position: -183
Score: 33.3 Sequence: ATACTTATCAAGAGT...
Locus tag: CD3598
Name: rhc Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Locus tag: CD3597
Name: msd Funciton: Methionine synthase activation domain (EC 2.1.1.13)
Locus tag: CD3596
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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rhc
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S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
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msd
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Methionine synthase activation domain (EC 2.1.1.13)
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -211
Score: 87.3 Sequence: TCTTATCCAGAGAGG...
Locus tag: CD1825
Name: metY Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Locus tag: CD1826
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
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metY
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O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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Position: -208
Score: 91 Sequence: TCTTATCAAGAGTGG...
Locus tag: CD1166
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3) |
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hom
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Homoserine dehydrogenase (EC 1.1.1.3)
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Position: -239
Score: 95.6 Sequence: CCTTATCAAGAGAGG...
Locus tag: CD0130
Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6) |
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metK
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S-adenosylmethionine synthetase (EC 2.5.1.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |